RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 RAB9AP51151 201 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CCL11P51671 97 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 EMP1P54849 157 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 AQP4P55087 323 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 RAB4BP61018 213 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 RPS23P62266 143 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 GRB2P62993 217 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 BTN3A2P78410 334 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 MT1XP80297 61 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CCZ1BP86790 482 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CCZ1P86791 482 aaPredicted RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 MXD1Q05195 221 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 KDSRQ06136 332 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 GABPB1Q06547 395 aaPredicted RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ADIGQ0VDE8 80 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 OR5I1Q13606 314 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 PDGFRLQ15198 375 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 KCNJ8Q15842 424 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CCL15Q16663 113 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 DEFB112Q30KQ8 113 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 LINC01554Q52M75 96 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 HSP90AA5PQ58FG0 334 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 SPRNQ5BIV9 151 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 TCP11X2Q5H9J9 407 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 DMRTC1Q5HYR2 192 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 C9orf152Q5JTZ5 239 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CHCHD2P9Q5T1J5 151 aaPredicted RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 SPATA1Q5VX52 437 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CST9LP1Q5W188 147 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 KDM4DQ6B0I6 523 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ZYG11AQ6WRX3 759 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 Q6ZS49 121 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 NIPA1Q7RTP0 329 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 DPPA2Q7Z7J5 298 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 YRDCQ86U90 279 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 MARCH3Q86UD3 253 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CCDC65Q8IXS2 484 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM86AQ8N2M4 240 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 BBS5Q8N3I7 341 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 TRIML2Q8N7C3 387 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 PRELID2Q8N945 189 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 IQUBQ8NA54 791 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 FER1L6-AS1Q8NA97 138 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 VPS37AQ8NEZ2 397 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 PROKR2Q8NFJ6 384 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 OR5B17Q8NGF7 314 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 OR8B3Q8NGG8 313 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 OR2G2Q8NGZ5 317 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 OR10A6Q8NH74 314 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 SUN5Q8TC36 379 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ZNF675Q8TD23 568 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CD200R1Q8TD46 325 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ORAOV1Q8WV07 137 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CANT1Q8WVQ1 401 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 C4orf3Q8WVX3 66 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 UFD1Q92890 307 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 FGF13Q92913 245 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 HAUS1Q96CS2 278 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CMBLQ96DG6 245 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CFAP36Q96G28 342 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 MRPL48Q96GC5 212 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 SNF8Q96H20 258 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 C7orf26Q96N11 449 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 RAB3IPQ96QF0 476 aaPredicted RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 GCNAQ96QF7 691 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 OR8B4Q96RC9 309 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 RNF2Q99496 336 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 FMO2Q99518 471 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 MICU1Q9BPX6 476 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 C11orf70Q9BRQ4 267 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 NIPSNAP3BQ9BS92 247 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ISCA1Q9BUE6 129 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 EMC6Q9BV81 110 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 MRPL9Q9BYD2 267 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 PARD6GQ9BYG4 376 aaPredicted RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 GSDMCQ9BYG8 508 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ACTR3CQ9C0K3 210 aaPredicted RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 YIPF3Q9GZM5 350 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 NXF2Q9GZY0 626 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 NXF5Q9H1B4 397 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 HSD3B7Q9H2F3 369 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 GOLPH3Q9H4A6 298 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 SYNCQ9H7C4 482 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 REEP1Q9H902 201 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 SPACA1Q9HBV2 294 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 LPAR2Q9HBW0 351 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 EIF2B3Q9NR50 452 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ANKEF1Q9NU02 776 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 BLOC1S4Q9NUP1 217 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ANO10Q9NW15 660 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 DCAF16Q9NXF7 216 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 RASL12Q9NYN1 266 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 TAS2R4Q9NYW5 299 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 AKAP7Q9P0M2 348 aaPredicted RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ACTR3BQ9P1U1 418 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 OPTCQ9UBM4 332 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 BCAP29Q9UHQ4 241 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 NUP50Q9UKX7 468 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 FUT9Q9Y231 359 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 RASD1Q9Y272 281 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms