RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 ADRB1P08588 477 aa12.78□□□□□ -0.36
PSME4-201ENST00000389993 ZNF79Q15937 498 aa12.78□□□□□ -0.36
PSME4-201ENST00000389993 FHL5Q5TD97 284 aa12.78□□□□□ -0.36
PSME4-201ENST00000389993 C1orf87Q8N0U7 546 aa12.78□□□□□ -0.36
PSME4-201ENST00000389993 FAM96BQ9Y3D0 163 aa12.78□□□□□ -0.36
PSME4-201ENST00000389993 LIMS1P48059 325 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 OR2B8PP59922 312 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 IFITM3Q01628 133 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 LRRC10Q5BKY1 277 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 RPUSD3Q6P087 351 aaKnown RBP12.77□□□□□ -0.36
PSME4-201ENST00000389993 OR13G1Q8NGZ3 307 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 SLC7A10Q9NS82 523 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 ARHGEF17Q96PE2 2063 aaPredicted RBP12.77□□□□□ -0.36
PSME4-201ENST00000389993 WDR81Q562E7 1941 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 MS4A18H0YCH9 400 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 ICMTO60725 284 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 KLK2P20151 261 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 RTP5Q14D33 572 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 MS4A18Q3C1V0 323 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 ZNF826PQ6ZT77 177 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 CARFQ8N187 725 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 ANGPTL6Q8NI99 470 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 NMES1Q9C002 83 aa12.77□□□□□ -0.36
PSME4-201ENST00000389993 AHCTF1Q8WYP5 2266 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 C21orf140B9A014 251 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 METTL15P1P0C7V9 234 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 PSG4Q00888 419 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 JMJD6Q6NYC1 403 aaPredicted RBP12.77□□□□□ -0.37
PSME4-201ENST00000389993 TMEM105Q8N8V8 129 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 IGHV3-21A0A0B4J1V1 117 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 C3orf85A0A1B0GTC6 90 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 GALR2O43603 387 aaPredicted RBP12.77□□□□□ -0.37
PSME4-201ENST00000389993 SMIM10L1P0DMW3 83 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 CCL8P80075 99 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 HABP2Q14520 560 aaPredicted RBP12.77□□□□□ -0.37
PSME4-201ENST00000389993 SKA3Q8IX90 412 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 OR1K1Q8NGR3 316 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 SMIM10Q96HG1 83 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 SIGLEC12Q96PQ1 595 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 NPIPB8E9PQR5 432 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 TMEM108Q6UXF1 575 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 ARHGEF39Q8N4T4 335 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 OR5AP2Q8NGF4 316 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 ZNRF4Q8WWF5 429 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 DNASE2BQ8WZ79 361 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 UQCC2Q9BRT2 126 aa12.77□□□□□ -0.37
PSME4-201ENST00000389993 STRAPQ9Y3F4 350 aaKnown RBP12.77□□□□□ -0.37
PSME4-201ENST00000389993 HPXP02790 462 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 MDFIC2A0A1B0GVS7 189 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 GPR31O00270 319 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 CCL21O00585 134 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 ANKRD34CP0C6C1 535 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 ADRA2CP18825 462 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 C11orf87Q6NUJ2 197 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 ADAMTS17Q8TE56 1095 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 LRFN3Q9BTN0 628 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 PATZ1Q9HBE1 687 aaKnown RBP12.76□□□□□ -0.37
PSME4-201ENST00000389993 TTRP02766 147 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 IRF3Q14653 427 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 RBMS3Q6XE24 437 aaKnown RBP12.76□□□□□ -0.37
PSME4-201ENST00000389993 BPIFCQ8NFQ6 507 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 SLC35E1Q96K37 410 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 TRAPPC4Q9Y296 219 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 OR5H1A6NKK0 313 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 UMAD1C9J7I0 102 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 ACKR3P25106 362 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 MITD1Q8WV92 249 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 ZNF75AQ96N20 296 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 WDR54Q9H977 334 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 TBX6O95947 436 aaPredicted RBP12.76□□□□□ -0.37
PSME4-201ENST00000389993 AKR1E2Q96JD6 320 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 DLL4Q9NR61 685 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 NTMQ9P121 344 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 STARD10Q9Y365 291 aa12.76□□□□□ -0.37
PSME4-201ENST00000389993 IGKV1D-42A0A075B6H8 117 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 ANKRD20A5PA0PJZ0 165 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 E5RGE8 158 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 HFEQ30201 348 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 GGNBP1Q5YKI7 109 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 GSX2Q9BZM3 304 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 GPR27Q9NS67 375 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 CACNG5Q9UF02 275 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 RBP4P02753 201 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 POLR2GP62487 172 aaKnown RBP eCLIP12.75□□□□□ -0.37
PSME4-201ENST00000389993 TBC1D26Q86UD7 250 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 CMTM2Q8TAZ6 248 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 BSCL2Q96G97 398 aaPredicted RBP12.75□□□□□ -0.37
PSME4-201ENST00000389993 NIPSNAP3BQ9BS92 247 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 C12orf10Q9HB07 376 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 KRBOX1C9JBD0 128 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 VSIG8P0DPA2 414 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 PNLIPRP3Q17RR3 467 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 IER2Q9BTL4 223 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 V9GYS6 101 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 SLC25A4P12235 298 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 GZMKP49863 264 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 ZNF764Q96H86 408 aaPredicted RBP12.75□□□□□ -0.37
PSME4-201ENST00000389993 SPINK4O60575 86 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 RD3LP0DJH9 198 aa12.75□□□□□ -0.37
PSME4-201ENST00000389993 OR11H7Q8NGC8 314 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms