RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TNFAIP6P98066 277 aaPredicted RBP14.19□□□□□ -0.14
COL2A1-202ENST00000380518 FOXC1Q12948 553 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 SKP2Q13309 424 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 OR4F17Q8NGA8 305 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 TM4SF19Q96DZ7 209 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 SLC52A3Q9NQ40 469 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 OR6C3Q9NZP0 311 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 CDC34P49427 236 aaPredicted RBP14.19□□□□□ -0.14
COL2A1-202ENST00000380518 HFEQ30201 348 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 WDR74Q6RFH5 385 aaPredicted RBP14.19□□□□□ -0.14
COL2A1-202ENST00000380518 D2HGDHQ8N465 521 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 J3QR89 54 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 MMP7P09237 267 aaPredicted RBP14.19□□□□□ -0.14
COL2A1-202ENST00000380518 ZXDAP98168 799 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 RPS4Y2Q8TD47 263 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 CXXC4Q9H2H0 198 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 GPR27Q9NS67 375 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 FZR1Q9UM11 496 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 POMT1Q9Y6A1 747 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 SPAG17Q6Q759 2223 aa14.19□□□□□ -0.14
COL2A1-202ENST00000380518 A0A1W2PN81 502 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 SMIM17P0DL12 118 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 CHRNA7P36544 502 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 VAMP3Q15836 100 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 MRGPRDQ8TDS7 321 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 ZNF107Q9UII5 783 aaPredicted RBP14.18□□□□□ -0.14
COL2A1-202ENST00000380518 PCOLCE2Q9UKZ9 415 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 RP1P56715 2156 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 ARAP2Q8WZ64 1704 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 A0A1W2PPV9 198 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 CD200P41217 278 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 SPEM2Q0P670 501 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 COL19A1Q14993 1142 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 HSD17B13Q7Z5P4 300 aaPredicted RBP14.18□□□□□ -0.14
COL2A1-202ENST00000380518 OR10AC1Q8NH08 325 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 ONECUT1Q9UBC0 465 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 TMEM265A0A087WTH1 108 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 SIGIRRQ6IA17 410 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 ZDHHC16Q969W1 377 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 ADTRPQ96IZ2 230 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 MIXL1Q9H2W2 232 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 MEX3AA1L020 520 aaKnown RBP14.18□□□□□ -0.14
COL2A1-202ENST00000380518 ZNF737O75373 536 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 GALR1P47211 349 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 PTTG1IPP53801 180 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 IRF3Q14653 427 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 ACSM6Q6P461 480 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 C1orf210Q8IVY1 113 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 MISP3Q96FF7 219 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 GLRX2Q9NS18 164 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 NAT8BQ9UHF3 227 aa14.18□□□□□ -0.14
COL2A1-202ENST00000380518 SELENOPP49908 381 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 DHRS7BQ6IAN0 325 aaPredicted RBP14.17□□□□□ -0.14
COL2A1-202ENST00000380518 CLEC18BQ6UXF7 455 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 C10orf111Q8N326 155 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 KCNK15Q9H427 330 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 SEBOXQ9HB31 216 aaPredicted RBP14.17□□□□□ -0.14
COL2A1-202ENST00000380518 CDK5RAP2Q96SN8 1893 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 LANCL1O43813 399 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 CRHP06850 196 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 POLR2GP62487 172 aaKnown RBP eCLIP14.17□□□□□ -0.14
COL2A1-202ENST00000380518 INPP5JQ15735 1006 aaPredicted RBP14.17□□□□□ -0.14
COL2A1-202ENST00000380518 Q56UQ5 140 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 C19orf35Q6ZS72 473 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 MYPOPQ86VE0 399 aaPredicted RBP14.17□□□□□ -0.14
COL2A1-202ENST00000380518 OR10G4Q8NGN3 311 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 OR10G9Q8NGN4 311 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 OR10G7Q8NGN6 311 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 CCL17Q92583 94 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 IGHV3-43A0A0B4J1X8 118 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 IGHV3-43DP0DP04 118 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 PMCHP20382 165 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 ZAR1Q86SH2 424 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 STARD10Q9Y365 291 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 SEC16AO15027 2179 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 SOCS1O15524 211 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 SLC25A5P05141 298 aaKnown RBP14.17□□□□□ -0.14
COL2A1-202ENST00000380518 CST2P09228 141 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 FABP4P15090 132 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 GNG4P50150 75 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 B3GNTL1Q67FW5 361 aaPredicted RBP14.17□□□□□ -0.14
COL2A1-202ENST00000380518 FAM24BQ8N5W8 94 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 OR2I1PQ8NGU4 316 aa14.17□□□□□ -0.14
COL2A1-202ENST00000380518 VDAC1P21796 283 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 VAMP8Q9BV40 100 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 GPR87Q9BY21 358 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 SLC26A1Q9H2B4 701 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 SLC25A22Q9H936 323 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 TCFL5Q9UL49 500 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 TRDCB7Z8K6 153 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 IQCJQ1A5X6 159 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 RNF151Q2KHN1 245 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 GAB4Q2WGN9 574 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 DEFB124Q8NES8 71 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 OR4S2Q8NH73 311 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 C3orf80F5H4A9 247 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 SYNGR2O43760 224 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 BMI1P35226 326 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 CT55Q8WUE5 264 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 FAM210BQ96KR6 192 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms