RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 NCMAPQ5T1S8 102 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 ELP2Q6IA86 826 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 VWA1Q6PCB0 445 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 C3P1Q6ZMU1 363 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 TRAPPC6BQ86SZ2 158 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 RNF138Q8WVD3 245 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 FOXB1Q99853 325 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 DDA1Q9BW61 102 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 SLC7A10Q9NS82 523 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 HEATR1Q9H583 2144 aaKnown RBP9.42□□□□□ -0.9
NEDD9-201ENST00000379433 SRSF10O75494 262 aaKnown RBP9.42□□□□□ -0.9
NEDD9-201ENST00000379433 IFNA2P01563 188 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 PMP2P02689 132 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 RAB2AP61019 212 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 UNC119Q13432 240 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 ZGRF1Q86YA3 2104 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 PIGCQ92535 297 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 EXTL1Q92935 676 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 INTS1Q8N201 2190 aaKnown RBP9.42□□□□□ -0.9
NEDD9-201ENST00000379433 HSPB6O14558 160 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 CD1AP06126 327 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 RBMXP38159 391 aaKnown RBP9.42□□□□□ -0.9
NEDD9-201ENST00000379433 SNRPEP62304 92 aaKnown RBP9.42□□□□□ -0.9
NEDD9-201ENST00000379433 HGFACQ04756 655 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 DEFB109BQ30KR1 87 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF528Q3MIS6 628 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 ELFN2Q5R3F8 820 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 SPATA46Q5T0L3 261 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 STEAP1BQ6NZ63 245 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF584Q8IVC4 421 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF100Q8IYN0 542 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 TMEM123Q8N131 208 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 SLC22A24Q8N4F4 322 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 OR51T1Q8NGJ9 327 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 PNPLA2Q96AD5 504 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 LYZL4Q96KX0 146 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 FAM173AQ9BQD7 235 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 TMEM208Q9BTX3 173 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 SHARPINQ9H0F6 387 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 SH2D2AQ9NP31 389 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 PNRC2Q9NPJ4 139 aaKnown RBP9.42□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF701Q9NV72 531 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-201ENST00000379433 ETV7Q9Y603 341 aa9.42□□□□□ -0.9
NEDD9-201ENST00000379433 M0QZK8 103 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 SDCBPO00560 298 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 WT1P19544 449 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 GLRA1P23415 457 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ATP5J2P56134 94 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ATXN7L3Q14CW9 347 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF239Q16600 458 aaKnown RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 SKA3Q8IX90 412 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 R3HDM4Q96D70 268 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 LINC00052Q96N35 136 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 CA10Q9NS85 328 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF581Q9P0T4 197 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF629Q9UEG4 869 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF736B4DX44 427 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ETV2O00321 342 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 SYNGR4O95473 234 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF17P17021 662 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ARL3P36405 182 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 MTCP1P56278 107 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 CXADRP78310 365 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 TNK1Q13470 666 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 CHRFAM7AQ494W8 412 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 SUMF1Q8NBK3 374 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF431Q8TF32 576 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 DYRK2Q92630 601 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 SEH1LQ96EE3 360 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 DAZAP1Q96EP5 407 aaKnown RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 PRR13Q9NZ81 148 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 SPTBN1Q01082 2364 aaKnown RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 AKAP6Q13023 2319 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ESPL1Q14674 2120 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 IGKV1-9A0A0C4DH69 117 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ANKRD20A5PA0PJZ0 165 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 C5orf49A4QMS7 147 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 AKR1C4P17516 323 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ACKR3P25106 362 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 NOVA1P51513 510 aaKnown RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 AIMP2Q13155 320 aaKnown RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 UBE2V2Q15819 145 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 CNEP1R1Q8N9A8 125 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 FDCSPQ8NFU4 85 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 SPTSSAQ969W0 71 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 SLAMF9Q96A28 289 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 SLC25A28Q96A46 364 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 NABP1Q96AH0 204 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ZC3HAV1LQ96H79 300 aaKnown RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF703Q9H7S9 590 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-201ENST00000379433 SHANK1Q9Y566 2161 aa9.41□□□□□ -0.9
NEDD9-201ENST00000379433 MEGF11A6BM72 1044 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 H7C417 338 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 NME2P1O60361 137 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 GLI4P10075 376 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 ZP3P21754 424 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 HRH1P35367 487 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 PSG4Q00888 419 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 KISS1Q15726 138 aa9.4□□□□□ -0.9
NEDD9-201ENST00000379433 PCK2Q16822 640 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms