RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 PCBD2Q9H0N5 130 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 MUC6Q6W4X9 2439 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 CACNA1GO43497 2377 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 TRAV39A0A0B4J263 110 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 IFNA21P01568 189 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 HIST1H1DP16402 221 aaKnown RBP8.35□□□□□ -1.07
SF3A3-201ENST00000373019 COMPP49747 757 aaPredicted RBP8.35□□□□□ -1.07
SF3A3-201ENST00000373019 EMP2P54851 167 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 ALG10Q5BKT4 473 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 TECTBQ96PL2 329 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 SLC25A13Q9UJS0 675 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 LRP12Q9Y561 859 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 TPRP12270 2363 aaKnown RBP8.35□□□□□ -1.07
SF3A3-201ENST00000373019 LOC107986453A0A1B0GWG9 222 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 FAM230AA0A1W2PPH8 454 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 CRYM-AS1A6NIL9 109 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 BGLAPP02818 100 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 GABRA3P34903 492 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 CDKN1AP38936 164 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 FBXW12Q6X9E4 464 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 CALHM1Q8IU99 346 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 CMTM8Q8IZV2 173 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 MOB3AQ96BX8 217 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 ST6GALNAC5Q9BVH7 336 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 G6PC2Q9NQR9 355 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 EHFQ9NZC4 300 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 OR6C3Q9NZP0 311 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 SERGEFQ9UGK8 458 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 HHLA2Q9UM44 414 aa8.35□□□□□ -1.07
SF3A3-201ENST00000373019 TRPM6Q9BX84 2022 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 IGHV2-70DA0A0C4DH43 119 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 HNRNPA1P09651 372 aaKnown RBP eCLIP8.34□□□□□ -1.07
SF3A3-201ENST00000373019 CD46P15529 392 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 BTN3A2P78410 334 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 ZP2Q05996 745 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 GRINAQ7Z429 371 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 LYZL2Q7Z4W2 148 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 ADAMTS18Q8TE60 1221 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 NUDT11Q96G61 164 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 PGAM5Q96HS1 289 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 ZNF845Q96IR2 970 aaPredicted RBP8.34□□□□□ -1.07
SF3A3-201ENST00000373019 C1orf147Q96MC9 270 aaPredicted RBP8.34□□□□□ -1.07
SF3A3-201ENST00000373019 GUCD1Q96NT3 240 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 IMMP2LQ96T52 175 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 GABRG3Q99928 467 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 C11orf1Q9H5F2 150 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 TRAPPC6AO75865 159 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 IGKV1D-16P01601 117 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 CSNK1A1P48729 337 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 RUNX1Q01196 453 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 ID2Q02363 134 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 HYAL1Q12794 435 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 IL13RA2Q14627 380 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 EXOSC7Q15024 291 aaKnown RBP8.34□□□□□ -1.07
SF3A3-201ENST00000373019 ACOT6Q3I5F7 207 aaPredicted RBP8.34□□□□□ -1.07
SF3A3-201ENST00000373019 SP6Q3SY56 376 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 SLC8B1Q6J4K2 584 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 NUP54Q7Z3B4 507 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 ODF3L1Q8IXM7 274 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 OR2L3Q8NG85 312 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 CISD1Q9NZ45 108 aaKnown RBP8.34□□□□□ -1.07
SF3A3-201ENST00000373019 GNG13Q9P2W3 67 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 FBLN5Q9UBX5 448 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 EMC9Q9Y3B6 208 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 A0A1W2PP11 408 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 DDAH2O95865 285 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 ISG15P05161 165 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 AMY2BP19961 511 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 GCH1P30793 250 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 ZNF74Q16587 644 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 TMEM183BQ1AE95 376 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 OGFOD3Q6PK18 319 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 AMZ2Q86W34 360 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 H1FOOQ8IZA3 346 aaPredicted RBP8.34□□□□□ -1.07
SF3A3-201ENST00000373019 CDRT4Q8N9R6 151 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 ARHGAP5-AS1Q96IT6 56 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 VPS25Q9BRG1 176 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 MAGT1Q9H0U3 335 aa8.34□□□□□ -1.07
SF3A3-201ENST00000373019 ELL3Q9HB65 397 aaPredicted RBP8.34□□□□□ -1.07
SF3A3-201ENST00000373019 PCNX3Q9H6A9 2034 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 IGKV1D-8A0A087WSZ0 117 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 IGSF23A1L1A6 192 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 FAM24AA6NFZ4 105 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF732B4DXR9 585 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 GALR1P47211 349 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 SNU13P55769 128 aaKnown RBP8.33□□□□□ -1.08
SF3A3-201ENST00000373019 RANP62826 216 aaKnown RBP8.33□□□□□ -1.08
SF3A3-201ENST00000373019 RUNX2Q13950 521 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 YAF2Q8IY57 180 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 OR4N2Q8NGD1 307 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 LMF2Q9BU23 707 aaKnown RBP8.33□□□□□ -1.08
SF3A3-201ENST00000373019 GPR34Q9UPC5 381 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 COX11Q9Y6N1 276 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 FREM3P0C091 2139 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 ASAH2BP0C7U1 165 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 CPMP14384 443 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 HSD11B1P28845 292 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 ZNF266Q14584 549 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 RTP5Q14D33 572 aa8.33□□□□□ -1.08
SF3A3-201ENST00000373019 SLC7A11Q9UPY5 501 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms