RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 LRRTM1Q86UE6 522 aa13.33□□□□□ -0.28
PFDN4-201ENST00000371419 Q8N402 240 aa13.33□□□□□ -0.28
PFDN4-201ENST00000371419 C1orf159Q96HA4 380 aa13.33□□□□□ -0.28
PFDN4-201ENST00000371419 SMR3AQ99954 134 aa13.33□□□□□ -0.28
PFDN4-201ENST00000371419 PATZ1Q9HBE1 687 aaKnown RBP13.33□□□□□ -0.28
PFDN4-201ENST00000371419 CKLFQ9UBR5 152 aa13.33□□□□□ -0.28
PFDN4-201ENST00000371419 TBC1D24Q9ULP9 559 aa13.33□□□□□ -0.28
PFDN4-201ENST00000371419 ETV7Q9Y603 341 aa13.33□□□□□ -0.28
PFDN4-201ENST00000371419 MTORP42345 2549 aa13.33□□□□□ -0.28
PFDN4-201ENST00000371419 CEACAM18A8MTB9 384 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.32□□□□□ -0.28
PFDN4-201ENST00000371419 PAHP00439 452 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 ACAA1P09110 424 aaPredicted RBP13.32□□□□□ -0.28
PFDN4-201ENST00000371419 SNRPBP14678 240 aaKnown RBP13.32□□□□□ -0.28
PFDN4-201ENST00000371419 MUC1P15941 1255 aaPredicted RBP13.32□□□□□ -0.28
PFDN4-201ENST00000371419 GLRA1P23415 457 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 CFPP27918 469 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 GMFBP60983 142 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 P2RY14Q15391 338 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 MICBQ29980 383 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 HACD4Q5VWC8 232 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 CYB5R2Q6BCY4 276 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 GDPD3Q7L5L3 318 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 POC1AQ8NBT0 407 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 OR4M1Q8NGD0 313 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 WDR13Q9H1Z4 485 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 MIOXQ9UGB7 285 aa13.32□□□□□ -0.28
PFDN4-201ENST00000371419 YLPM1P49750 1951 aaKnown RBP13.32□□□□□ -0.28
PFDN4-201ENST00000371419 IGHV3OR15-7A0A075B7D8 119 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 MEGF11A6BM72 1044 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 NDUFA2O43678 99 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 NOS1APO75052 506 aaPredicted RBP13.31□□□□□ -0.28
PFDN4-201ENST00000371419 CYB5AP00167 134 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 PLATP00750 562 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 PGA5P0DJD9 388 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 IGFBP3P17936 291 aaPredicted RBP13.31□□□□□ -0.28
PFDN4-201ENST00000371419 FSTP19883 344 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 CPT2P23786 658 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 INPP1P49441 399 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 CCBE1Q6UXH8 406 aaPredicted RBP13.31□□□□□ -0.28
PFDN4-201ENST00000371419 CLEC9AQ6UXN8 241 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 SLC25A26Q70HW3 274 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 FAM90A1Q86YD7 464 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 OR51A2Q8NGJ7 313 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 OR5H6Q8NGV6 325 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 ORAI1Q96D31 301 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 CPNE2Q96FN4 548 aaPredicted RBP13.31□□□□□ -0.28
PFDN4-201ENST00000371419 SPACA5Q96QH8 159 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 GFI1Q99684 422 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 NRIP2Q9BQI9 281 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 TMEM138Q9NPI0 162 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 RASL12Q9NYN1 266 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 DNAJB11Q9UBS4 358 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 ABCA2Q9BZC7 2435 aa13.31□□□□□ -0.28
PFDN4-201ENST00000371419 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.31□□□□□ -0.284e-11■■■■□ 19.9
PFDN4-201ENST00000371419 FAM157AC9JC47 383 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 F5H0A9 414 aaPredicted RBP13.3□□□□□ -0.28
PFDN4-201ENST00000371419 LY6G6DO95868 133 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 GYPAP02724 150 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 ALDOBP05062 364 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 WNT2P09544 360 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 RPS2P15880 293 aaKnown RBP13.3□□□□□ -0.28
PFDN4-201ENST00000371419 BDKRB2P30411 391 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 POU3F4P49335 361 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 KRTAP1-1Q07627 177 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 PDZK1IP1Q13113 114 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 KISS1Q15726 138 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 HES5Q5TA89 166 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 MZT2BQ6NZ67 158 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 ZNF554Q86TJ5 538 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 MKXQ8IYA7 352 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 LINC01356Q8N9X3 169 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 LGALS14Q8TCE9 139 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 C15orf40Q8WUR7 153 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 RAB40AQ8WXH6 277 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 RFT1Q96AA3 541 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 MSI2Q96DH6 328 aaKnown RBP13.3□□□□□ -0.28
PFDN4-201ENST00000371419 SEH1LQ96EE3 360 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 ZNF488Q96MN9 340 aa13.3□□□□□ -0.28
PFDN4-201ENST00000371419 TRAV8-7A0A075B6U6 113 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 A0A0G2JMP0 313 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 A0A0X1KG70 313 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 B4DSR2 109 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 TNFRSF13BO14836 293 aaPredicted RBP13.29□□□□□ -0.28
PFDN4-201ENST00000371419 CD5LO43866 347 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 TPPPO94811 219 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 NXPH2O95156 264 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 MAS1P04201 325 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 ADRA2CP18825 462 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 SMIM21Q3B7S5 101 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 GLT8D1Q68CQ7 371 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 LYPD2Q6UXB3 125 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 NLRC3Q7RTR2 1065 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 RNF144BQ7Z419 303 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 OR4M2Q8NGB6 313 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 OR8B3Q8NGG8 313 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 OR52N4Q8NGI2 321 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 SLAMF9Q96A28 289 aa13.29□□□□□ -0.28
PFDN4-201ENST00000371419 NEIL1Q96FI4 390 aaPredicted RBP13.29□□□□□ -0.28
PFDN4-201ENST00000371419 OR8B2Q96RD0 313 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms