RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 WDFY3Q8IZQ1 3526 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 PTGER4P35408 488 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 C9orf152Q5JTZ5 239 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 MRPL14Q6P1L8 145 aaKnown RBP12.82□□□□□ -0.36
PRKN-204ENST00000366896 HIST2H3AQ71DI3 136 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 TMPRSS7Q7RTY8 843 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 ZNF565Q8N9K5 539 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 MR1Q95460 341 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 LYZL4Q96KX0 146 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 PFDN5Q99471 154 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 DECR2Q9NUI1 292 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 C1orf123Q9NWV4 160 aa12.82□□□□□ -0.36
PRKN-204ENST00000366896 TNFSF15O95150 251 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 SEC11BP0C7V7 166 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 RD3LP0DJH9 198 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 GPX4P36969 197 aaPredicted RBP12.81□□□□□ -0.36
PRKN-204ENST00000366896 SNU13P55769 128 aaKnown RBP12.81□□□□□ -0.36
PRKN-204ENST00000366896 HIST1H3AP68431 136 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 HIST2H3PS2Q5TEC6 136 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 TMEM164Q5U3C3 297 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 OR51T1Q8NGJ9 327 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 SPACA9Q96E40 222 aaPredicted RBP12.81□□□□□ -0.36
PRKN-204ENST00000366896 GNRHR2Q96P88 292 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 C19orf25Q9UFG5 118 aaPredicted RBP12.81□□□□□ -0.36
PRKN-204ENST00000366896 A0A087WZY1 265 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 DHRS3O75911 302 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 IFNA2P01563 188 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 LMO1P25800 156 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 OTX1P32242 354 aaPredicted RBP12.81□□□□□ -0.36
PRKN-204ENST00000366896 SSTP61278 116 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 H3F3AP84243 136 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 ZNF616Q08AN1 781 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 TMEM176BQ3YBM2 270 aaPredicted RBP12.81□□□□□ -0.36
PRKN-204ENST00000366896 PYY3Q5JQD4 70 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 HEPN1Q6WQI6 88 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 TIPARPQ7Z3E1 657 aaKnown RBP12.81□□□□□ -0.36
PRKN-204ENST00000366896 GJC3Q8NFK1 279 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 ERGIC1Q969X5 290 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 PECRQ9BY49 303 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 CHST5Q9GZS9 411 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 OPA3Q9H6K4 179 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 LUZP4Q9P127 313 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 SDK2Q58EX2 2172 aa12.81□□□□□ -0.36
PRKN-204ENST00000366896 HPNP05981 417 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 MSR1P21757 451 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 RBMXP38159 391 aaKnown RBP12.8□□□□□ -0.36
PRKN-204ENST00000366896 CSNK2A1P68400 391 aaPredicted RBP12.8□□□□□ -0.36
PRKN-204ENST00000366896 PRAMEF20Q5VT98 475 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 C6orf15Q6UXA7 325 aaPredicted RBP12.8□□□□□ -0.36
PRKN-204ENST00000366896 CSNK2A3Q8NEV1 391 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 FNDC9Q8TBE3 224 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 PGAM5Q96HS1 289 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 SLC35B3Q9H1N7 401 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 PLEKHA2Q9HB19 425 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 EHFQ9NZC4 300 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 IFITM10A6NMD0 228 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 MASP2O00187 686 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 YIF1AO95070 293 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 CDX1P47902 265 aaPredicted RBP12.8□□□□□ -0.36
PRKN-204ENST00000366896 SUCLG1P53597 346 aaKnown RBP12.8□□□□□ -0.36
PRKN-204ENST00000366896 RPS23P62266 143 aaKnown RBP12.8□□□□□ -0.36
PRKN-204ENST00000366896 HAS2Q92819 552 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 TMEM54Q969K7 222 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 NELFAQ9H3P2 528 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 KCNJ16Q9NPI9 418 aa12.8□□□□□ -0.36
PRKN-204ENST00000366896 ARID1AO14497 2285 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 DHRS7CA6NNS2 312 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 KNG1P01042 644 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 BLVRBP30043 206 aaPredicted RBP12.79□□□□□ -0.36
PRKN-204ENST00000366896 GUCA1AP43080 201 aaPredicted RBP12.79□□□□□ -0.36
PRKN-204ENST00000366896 CAMLGP49069 296 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 CLDN17P56750 224 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 KIAA0141Q14154 515 aaPredicted RBP12.79□□□□□ -0.36
PRKN-204ENST00000366896 RPUSD3Q6P087 351 aaKnown RBP12.79□□□□□ -0.36
PRKN-204ENST00000366896 AKR7LQ8NHP1 331 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 CD300LFQ8TDQ1 290 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 GINS3Q9BRX5 216 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 WDR54Q9H977 334 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 C19orf12Q9NSK7 152 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 C14orf166Q9Y224 244 aaKnown RBP12.79□□□□□ -0.36
PRKN-204ENST00000366896 LSM5Q9Y4Y9 91 aaKnown RBP12.79□□□□□ -0.36
PRKN-204ENST00000366896 C9J4A7 227 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 VAMP5O95183 116 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 OR2C1O95371 312 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 SERPINA2P20848 420 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 FHITP49789 147 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 DEFA6Q01524 100 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 PHYHD1Q5SRE7 291 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 RASL10BQ96S79 203 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 ZNF160Q9HCG1 818 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 PADI1Q9ULC6 663 aa12.79□□□□□ -0.36
PRKN-204ENST00000366896 STMND1H3BQB6 276 aa12.78□□□□□ -0.36
PRKN-204ENST00000366896 TP53I11O14683 189 aa12.78□□□□□ -0.36
PRKN-204ENST00000366896 CTSDP07339 412 aaPredicted RBP12.78□□□□□ -0.36
PRKN-204ENST00000366896 FAHP16930 419 aa12.78□□□□□ -0.36
PRKN-204ENST00000366896 CLINT1Q14677 625 aa12.78□□□□□ -0.36
PRKN-204ENST00000366896 CHRFAM7AQ494W8 412 aa12.78□□□□□ -0.36
PRKN-204ENST00000366896 BSCL2Q96G97 398 aaPredicted RBP12.78□□□□□ -0.36
PRKN-204ENST00000366896 PBDC1Q9BVG4 233 aa12.78□□□□□ -0.36
PRKN-204ENST00000366896 NXT1Q9UKK6 140 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms