RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 MAP1LC3B2A6NCE7 125 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 MMP9P14780 707 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 MAP1LC3BQ9GZQ8 125 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 VSIG4Q9Y279 399 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 TIMM8BQ9Y5J9 83 aaPredicted RBP10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 DHRS7CA6NNS2 312 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 CA11O75493 328 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 CCKARP32238 428 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 ALKBH3Q96Q83 286 aaPredicted RBP10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 MYOGP15173 224 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 SMIM15Q7Z3B0 74 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 FAM58AQ8N1B3 248 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 APOBEC4Q8WW27 367 aaKnown RBP10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 SLC25A38Q96DW6 304 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 IGHV1OR21-1A0A087WYE8 117 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 CST7O76096 145 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 ANKRD34CP0C6C1 535 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 DBX2Q6ZNG2 339 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 YRDCQ86U90 279 aaKnown RBP10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 CMTM2Q8TAZ6 248 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZDHHC11Q9H8X9 412 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 SLC2A9Q9NRM0 540 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 SSUH2Q9Y2M2 353 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 IGHV5-51A0A0C4DH38 117 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 DXOO77932 396 aaKnown RBP10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 VSIG10L2P0DP72 767 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 BHLHE23Q8NDY6 225 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 OR1L3Q8NH93 324 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 TICRRQ7Z2Z1 1910 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 SULT1A1P50225 295 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 RAC3P60763 192 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZP4Q12836 540 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 CEACAM16Q2WEN9 425 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 CD200P41217 278 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 WDR73Q6P4I2 378 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 A0A1B0GTH9 108 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 TNFSF11O14788 317 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 CST2P09228 141 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 CPEB3Q8NE35 698 aaKnown RBP10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZBTB25P24278 435 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 KIR2DS2P43631 304 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 SULT1A2P50226 295 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 KIAA1456Q9P272 454 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 FAM74A7A6NL05 159 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 TMPRSS7Q7RTY8 843 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 HPSE2Q8WWQ2 592 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 FOXB1Q99853 325 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 PPP1R3CQ9UQK1 317 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 TTC28Q96AY4 2481 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 A0A1W2PPH5 198 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 CDRT15L2A8MXV6 281 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 CDAP32320 146 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 CLEC9AQ6UXN8 241 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 ANAPC16Q96DE5 110 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 RNF24Q9Y225 148 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 ADAM20O43506 726 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 HPP00738 406 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 TAAR3PQ9P1P4 343 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 UBE2L5PA0A1B0GUS4 154 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 HLA-DRB3P79483 266 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 NEIL1Q96FI4 390 aaPredicted RBP10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZNF230Q9UIE0 474 aaPredicted RBP10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 COL6A6A6NMZ7 2263 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 VSIG8P0DPA2 414 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 NPTNQ9Y639 398 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 TANC1Q9C0D5 1861 aa10.44□□□□□ -0.74
CDC42BPA-202ENST00000366764 A0A1B0GU03 582 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 GVQW1Q8N7I0 195 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 AQP10Q96PS8 301 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZNF576Q9H609 170 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 OR8U1Q8NH10 309 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 AQP3Q92482 292 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 C6orf201Q7Z4U5 140 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 CBLN2Q8IUK8 224 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 TRDCB7Z8K6 153 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 ANKRD37Q7Z713 158 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 POM121Q96HA1 1249 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 CD74P04233 296 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 PEBP1P30086 187 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 LSM11P83369 360 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 SLC38A11Q08AI6 406 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZXDCQ2QGD7 858 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZNF528Q3MIS6 628 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 FAM173AQ9BQD7 235 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 MMP24Q9Y5R2 645 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 C7orf77A4D0Y5 90 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 OTOL1A6NHN0 477 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 FGF2P09038 288 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 IFI44Q8TCB0 444 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 SCARF2Q96GP6 870 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 NRIP2Q9BQI9 281 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 PCNX2A6NKB5 2137 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 MGST1P10620 155 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZNF17P17021 662 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 SRD5A2P31213 254 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 PDZD11Q5EBL8 140 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 PITX3O75364 302 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 UBE2G1P62253 170 aa10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 SUMO1P63165 101 aaKnown RBP10.43□□□□□ -0.74
CDC42BPA-202ENST00000366764 KHDC3LQ587J8 217 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms