RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 GSX2Q9BZM3 304 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 ACAA2P42765 397 aaKnown RBP16.36■□□□□ 0.21
CLIP2-202ENST00000361545 TXN2Q99757 166 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 LRFN3Q9BTN0 628 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 ADAM19Q9H013 955 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 ZNF785A8K8V0 405 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 SOX15O60248 233 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 TOX4O94842 621 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 IGFBP7Q16270 282 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 SLC23A3Q6PIS1 610 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 SLIRPQ9GZT3 109 aaKnown RBP16.36■□□□□ 0.21
CLIP2-202ENST00000361545 ZNF331Q9NQX6 463 aaPredicted RBP16.36■□□□□ 0.21
CLIP2-202ENST00000361545 NUDT19A8MXV4 375 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 GOSR1O95249 250 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 CEACAM3P40198 252 aa16.36■□□□□ 0.21
CLIP2-202ENST00000361545 ZNF770Q6IQ21 691 aaPredicted RBP16.36■□□□□ 0.21
CLIP2-202ENST00000361545 MBP02144 154 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 TIGITQ495A1 244 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 ASB5Q8WWX0 329 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 RAB33BQ9H082 229 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 WDR13Q9H1Z4 485 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 UPK3AO75631 287 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 BCL3P20749 454 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 CDC20Q12834 499 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 PRR27Q6MZM9 219 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 OPN3Q9H1Y3 402 aaPredicted RBP16.35■□□□□ 0.21
CLIP2-202ENST00000361545 HS3ST3B1Q9Y662 390 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 SCGB1D1O95968 90 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 EXOSC2Q13868 293 aaKnown RBP16.35■□□□□ 0.21
CLIP2-202ENST00000361545 H3F3CQ6NXT2 135 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 CMTM3Q96MX0 182 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 PIGMQ9H3S5 423 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 MTFP1Q9UDX5 166 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 LNP1A1A4G5 178 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 IL11P20809 199 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 GALP22466 123 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 DMKNQ6E0U4 476 aaPredicted RBP16.35■□□□□ 0.21
CLIP2-202ENST00000361545 BAP18Q8IXM2 172 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 MS4A5Q9H3V2 200 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 RNF7Q9UBF6 113 aa16.35■□□□□ 0.21
CLIP2-202ENST00000361545 ZNF727A8MUV8 499 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 MPPED2Q15777 294 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 INO80CQ6PI98 192 aaPredicted RBP16.34■□□□□ 0.21
CLIP2-202ENST00000361545 IL17BQ9UHF5 180 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 GEMIN2O14893 280 aaKnown RBP16.34■□□□□ 0.21
CLIP2-202ENST00000361545 NDUFA6P56556 154 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 RPS4XP62701 263 aaKnown RBP16.34■□□□□ 0.21
CLIP2-202ENST00000361545 TMEM267Q0VDI3 215 aaPredicted RBP16.34■□□□□ 0.21
CLIP2-202ENST00000361545 RPUSD3Q6P087 351 aaKnown RBP16.34■□□□□ 0.21
CLIP2-202ENST00000361545 TIPARPQ7Z3E1 657 aaKnown RBP16.34■□□□□ 0.21
CLIP2-202ENST00000361545 AMMECR1Q9Y4X0 333 aaPredicted RBP16.34■□□□□ 0.21
CLIP2-202ENST00000361545 SPTBN2O15020 2390 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 HAND1O96004 215 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 LTBRP36941 435 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 OR5AP2Q8NGF4 316 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 ZNHIT1O43257 154 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 RRASP10301 218 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 ERGP11308 486 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 MVDP53602 400 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 ACSM6Q6P461 480 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 BTF3L4Q96K17 158 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 PECRQ9BY49 303 aa16.34■□□□□ 0.21
CLIP2-202ENST00000361545 SPNP16150 400 aa16.33■□□□□ 0.21
CLIP2-202ENST00000361545 PAX6P26367 422 aa16.33■□□□□ 0.21
CLIP2-202ENST00000361545 NECAP1Q8NC96 275 aa16.33■□□□□ 0.21
CLIP2-202ENST00000361545 RXFP4Q8TDU9 374 aa16.33■□□□□ 0.21
CLIP2-202ENST00000361545 C3orf85A0A1B0GTC6 90 aa16.33■□□□□ 0.21
CLIP2-202ENST00000361545 SERTM2A0A1B0GWG4 89 aa16.33■□□□□ 0.21
CLIP2-202ENST00000361545 AVPI1Q5T686 147 aa16.33■□□□□ 0.21
CLIP2-202ENST00000361545 TMEM171Q8WVE6 324 aa16.33■□□□□ 0.2
CLIP2-202ENST00000361545 H7BYZ3 331 aa16.33■□□□□ 0.2
CLIP2-202ENST00000361545 FAM122BQ7Z309 247 aa16.33■□□□□ 0.2
CLIP2-202ENST00000361545 OR5B3Q8NH48 314 aa16.33■□□□□ 0.2
CLIP2-202ENST00000361545 OR2J1Q9GZK6 312 aa16.33■□□□□ 0.2
CLIP2-202ENST00000361545 IGHV3OR15-7A0A075B7D8 119 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 DCTN6O00399 190 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 DNPH1O43598 174 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 ANKRD34CP0C6C1 535 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 CTRB1P17538 263 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 CTRB2Q6GPI1 263 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.32■□□□□ 0.2
CLIP2-202ENST00000361545 A0A1W2PR77 199 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 SH2D7A6NKC9 451 aaPredicted RBP16.32■□□□□ 0.2
CLIP2-202ENST00000361545 UMAD1C9J7I0 102 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 NDUFB6O95139 128 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 MRPS11P82912 194 aaKnown RBP16.32■□□□□ 0.2
CLIP2-202ENST00000361545 PPP1R1AQ13522 171 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 PLAC9Q5JTB6 97 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 C19orf48Q6RUI8 117 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 GPA33Q99795 319 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 OR5I1Q13606 314 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 GLDNQ6ZMI3 551 aaPredicted RBP16.32■□□□□ 0.2
CLIP2-202ENST00000361545 ZNF485Q8NCK3 441 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 ZPLD1Q8TCW7 415 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 GPR27Q9NS67 375 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 MITD1Q8WV92 249 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 CACNG5Q9UF02 275 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 KPTNQ9Y664 436 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 V9GYS6 101 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 SOCS1O15524 211 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms