RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 RNF121Q9H920 327 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 CHODLQ9H9P2 273 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 RHOFQ9HBH0 211 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 PCDHB16Q9NRJ7 776 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 ABCB10Q9NRK6 738 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 TAS2R8Q9NYW2 309 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 IL36GQ9NZH8 169 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 RBMX2Q9Y388 322 aaKnown RBP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 RHBDD3Q9Y3P4 386 aa5.91□□□□□ -1.46
VPS13A-201ENST00000355766 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS13A-201ENST00000355766 A0A1W2PQ09 198 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 NAP1L6A6NFF2 107 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 GGT3PA6NGU5 568 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 CA11O75493 328 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 PAHP00439 452 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 IGLV1-44P01699 117 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 HLA-HP01893 362 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 LCATP04180 440 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 CHRM2P08172 466 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 CSF3P09919 207 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 OCMP0CE72 109 aaPredicted RBP5.9□□□□□ -1.46
VPS13A-201ENST00000355766 GSTT2BP0CG30 244 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 SLC2A1P11166 492 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 CBR1P16152 277 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 SELEP16581 610 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF14P17017 642 aaPredicted RBP5.9□□□□□ -1.46
VPS13A-201ENST00000355766 TBPP20226 339 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 IGHV1-2P23083 117 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 DSCR9P59020 149 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 ACTBP60709 375 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 ACTG1P63261 375 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 QRFPP83859 136 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 IFITM3Q01628 133 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 PPA1Q15181 289 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 GABRA6Q16445 453 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 ODF4Q2M2E3 257 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 SNAI3Q3KNW1 292 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 HES5Q5TA89 166 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 OTPQ5XKR4 325 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 MZT2BQ6NZ67 158 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 FBXW12Q6X9E4 464 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 DTX2Q86UW9 622 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 SAXO1Q8IYX7 474 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 OR5AS1Q8N127 324 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 OR8H2Q8N162 312 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 CENPSQ8N2Z9 138 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 JAGN1Q8N5M9 183 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 ZSCAN4Q8NAM6 433 aaPredicted RBP5.9□□□□□ -1.46
VPS13A-201ENST00000355766 CPEB3Q8NE35 698 aaKnown RBP5.9□□□□□ -1.46
VPS13A-201ENST00000355766 SLC30A7Q8NEW0 376 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 OR13C9Q8NGT0 318 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 AKR7LQ8NHP1 331 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 SYNPRQ8TBG9 265 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 NEUROG1Q92886 237 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 SGK3Q96BR1 496 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 FAM71F1Q96KD3 344 aaPredicted RBP5.9□□□□□ -1.46
VPS13A-201ENST00000355766 LYZL4Q96KX0 146 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF75AQ96N20 296 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.9□□□□□ -1.46
VPS13A-201ENST00000355766 FAIMQ9NVQ4 179 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 RBFOX1Q9NWB1 397 aaKnown RBP5.9□□□□□ -1.46
VPS13A-201ENST00000355766 NPAP1Q9NZP6 1156 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 MRPL15Q9P015 296 aaKnown RBP5.9□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF319Q9P2F9 582 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 PRSS50Q9UI38 385 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 RAB22AQ9UL26 194 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 TBC1D24Q9ULP9 559 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 CLEC4AQ9UMR7 237 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 PIGLQ9Y2B2 252 aa5.9□□□□□ -1.46
VPS13A-201ENST00000355766 LOC100509620A0A075B734 347 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 A0A0G2JMP0 313 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 A0A0X1KG70 313 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 TMEM272A0A1B0GTI8 110 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 CIB4A0PJX0 185 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 SMIM30A4D0T7 59 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A10PA6NDY2 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A18PA6NE21 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A16PA6NEW6 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A20PA6NIJ5 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A8PA6NJQ4 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A7PA6NKC0 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 OR5H1A6NKK0 313 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 OR5B21A6NL26 309 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 CENPXA8MT69 81 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A22PA8MWA6 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 TMEM14DPA8MWL7 114 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A12PA8MX19 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A5PA8MXJ8 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A23PA8MXZ1 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 AKR7A2O43488 359 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 CD8AP01732 235 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 IGHV3-9P01782 118 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A15PP0C7V4 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A13PP0C7W8 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A14PP0C7W9 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM90A24PP0C7X0 464 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 CD79AP11912 226 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 AZGP1P25311 298 aaKnown RBP5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAUP35544 74 aaKnown RBP5.89□□□□□ -1.47
VPS13A-201ENST00000355766 INPP1P49441 399 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms