RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 C2CD4CQ8TF44 421 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 SGCZQ96LD1 299 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 BCO1Q9HAY6 547 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 EDARQ9UNE0 448 aa16.94■□□□□ 0.3
COL13A1-201ENST00000354547 ZFP36L1Q07352 338 aaKnown RBP16.93■□□□□ 0.3
COL13A1-201ENST00000354547 IGSF11Q5DX21 431 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 FAM76BQ5HYJ3 339 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 ACER2Q5QJU3 275 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 PPP1R32Q7Z5V6 425 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 SUMF1Q8NBK3 374 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 RCC2Q9P258 522 aaKnown RBP16.93■□□□□ 0.3
COL13A1-201ENST00000354547 DOCK10Q96BY6 2186 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 KIAA1549Q9HCM3 1950 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 OR6C6A6NF89 314 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 NTN3O00634 580 aaPredicted RBP16.93■□□□□ 0.3
COL13A1-201ENST00000354547 TAAR5O14804 337 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 C1QL1O75973 258 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 OR2V1Q8NHB1 315 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 AKR1E2Q96JD6 320 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 GPR35Q9HC97 309 aa16.93■□□□□ 0.3
COL13A1-201ENST00000354547 LRRC3CA6NJW4 275 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 PRKACAP17612 351 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 PPT1P50897 306 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 MALLQ13021 153 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 EIF3IQ13347 325 aaKnown RBP16.92■□□□□ 0.3
COL13A1-201ENST00000354547 TMEM187Q14656 261 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 HFEQ30201 348 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 CPEB3Q8NE35 698 aaKnown RBP16.92■□□□□ 0.3
COL13A1-201ENST00000354547 SEC11CQ9BY50 192 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 C3orf80F5H4A9 247 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 CA11O75493 328 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 EDN3P14138 238 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 Q6ZPA2 131 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 ZNF611Q8N823 705 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 HSD17B11Q8NBQ5 300 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 SAT2Q96F10 170 aaPredicted RBP16.92■□□□□ 0.3
COL13A1-201ENST00000354547 TCFL5Q9UL49 500 aa16.92■□□□□ 0.3
COL13A1-201ENST00000354547 CARHSP1Q9Y2V2 147 aaKnown RBP16.92■□□□□ 0.3
COL13A1-201ENST00000354547 CCDC163A0A0D9SF12 145 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 JTBO76095 146 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 AADACP22760 399 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 DUSP1P28562 367 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 ECI1P42126 302 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 SULT1A2P50226 295 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 NHLH2Q02577 135 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 TMEM268Q5VZI3 342 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 FBXW12Q6X9E4 464 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 Q6ZSR3 168 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 SECTM1Q8WVN6 248 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 PAPOLGQ9BWT3 736 aaKnown RBP16.91■□□□□ 0.3
COL13A1-201ENST00000354547 ZNF286AQ9HBT8 521 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 TUBD1Q9UJT1 453 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 HSF4Q9ULV5 492 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 CYC1P08574 325 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 HERV-K104P61576 105 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 SPIN3Q5JUX0 258 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 DHRS11Q6UWP2 260 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 GLYATL2Q8WU03 294 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 hCG_38984A0A1B0GV85 526 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 FLI1Q01543 452 aaPredicted RBP16.91■□□□□ 0.3
COL13A1-201ENST00000354547 TCEAL6Q6IPX3 200 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 TCEAL3Q969E4 200 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 WFDC1Q9HC57 220 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 NDRG3Q9UGV2 375 aa16.91■□□□□ 0.3
COL13A1-201ENST00000354547 NXPH3O95157 252 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 FUT6P51993 359 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 FOXG1P55316 489 aaPredicted RBP16.9■□□□□ 0.3
COL13A1-201ENST00000354547 HS3ST6Q96QI5 342 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 SH3BGRL3Q9H299 93 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 CRIM1Q9NZV1 1036 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 PRELID3BQ9Y3B1 194 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 PRH1P02810 166 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 CELA3AP09093 270 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 DTYMKP23919 212 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 CYB561P49447 251 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 NSUN5P2Q63ZY6 315 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 TIPARPQ7Z3E1 657 aaKnown RBP16.9■□□□□ 0.3
COL13A1-201ENST00000354547 OR10Z1Q8NGY1 313 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 KCNE4Q8WWG9 221 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 SLAMF9Q96A28 289 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 HES7Q9BYE0 225 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 IL36RNQ9UBH0 155 aa16.9■□□□□ 0.3
COL13A1-201ENST00000354547 TSPAN15O95858 294 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 HLA-HP01893 362 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 GLP1RP43220 463 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 DUSP3P51452 185 aaPredicted RBP16.89■□□□□ 0.29
COL13A1-201ENST00000354547 C10orf91Q5T1B1 145 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 BTNL8Q6UX41 500 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 NEK7Q8TDX7 302 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 TP53RKQ96S44 253 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 OR51B6Q9H340 312 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 CALHM2Q9HA72 323 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 NOSIPQ9Y314 301 aaKnown RBP16.89■□□□□ 0.29
COL13A1-201ENST00000354547 RFNGQ9Y644 331 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 NUDT19A8MXV4 375 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 PDCD6O75340 191 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 MIDNQ504T8 468 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 DHRS7BQ6IAN0 325 aaPredicted RBP16.89■□□□□ 0.29
COL13A1-201ENST00000354547 KIRREL1Q96J84 757 aa16.89■□□□□ 0.29
COL13A1-201ENST00000354547 C20orf24Q9BUV8 137 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms