RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 UTRNP46939 3433 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 HEATR5BQ9P2D3 2071 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 NOTCH4Q99466 2003 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 M6PRP20645 277 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 ZNF658BQ4V348 819 aaPredicted RBP11.98□□□□□ -0.49
SMC6-201ENST00000351948 SPINK9Q5DT21 86 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 RAXQ9Y2V3 346 aa11.98□□□□□ -0.49
SMC6-201ENST00000351948 IGLV1-36A0A0B4J1U3 117 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 SSTP61278 116 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 KRTCAP3Q53RY4 240 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 BTNL3Q6UXE8 466 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 THNSL2Q86YJ6 484 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 TMED6Q8WW62 240 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 IMMP1LQ96LU5 166 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 PECRQ9BY49 303 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 GPR31O00270 319 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 TAS2R30P59541 319 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 OR2G3Q8NGZ4 309 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 SFT2D1Q8WV19 159 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 OR2D2Q9H210 308 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 PUS1Q9Y606 427 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMC6-201ENST00000351948 AHRRA9YTQ3 701 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 C17orf112F2Z3M2 114 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 CST7O76096 145 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 HPNP05981 417 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 ZNF266Q14584 549 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 ARRDC1Q8N5I2 433 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 HDHD3Q9BSH5 251 aaPredicted RBP11.97□□□□□ -0.49
SMC6-201ENST00000351948 RTN4RQ9BZR6 473 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 UNKLQ9H9P5 680 aaKnown RBP11.97□□□□□ -0.49
SMC6-201ENST00000351948 CYB5R1Q9UHQ9 305 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 ZFP92A6NM28 416 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 GIPP09681 153 aaPredicted RBP11.97□□□□□ -0.49
SMC6-201ENST00000351948 VSIG8P0DPA2 414 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 ZFP36L1Q07352 338 aaKnown RBP11.97□□□□□ -0.49
SMC6-201ENST00000351948 TMEM182Q6ZP80 229 aaPredicted RBP11.97□□□□□ -0.49
SMC6-201ENST00000351948 FRZBQ92765 325 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 NPAP1Q9NZP6 1156 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 LHFPL6Q9Y693 200 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 RALGAPA1Q6GYQ0 2036 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 PKDREJQ9NTG1 2253 aa11.97□□□□□ -0.49
SMC6-201ENST00000351948 FAM157AC9JC47 383 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 TMEM128Q5BJH2 165 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 ARTNQ5T4W7 220 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 LRFN3Q9BTN0 628 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 TAF9BQ9HBM6 251 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 A0A1B0GUH1 482 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 SEMA7AO75326 666 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 PPP1R1AQ13522 171 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 SNRNP200O75643 2136 aaKnown RBP11.96□□□□□ -0.49
SMC6-201ENST00000351948 ALDH3B1P43353 468 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 RBMS3Q6XE24 437 aaKnown RBP11.96□□□□□ -0.49
SMC6-201ENST00000351948 ZNF826PQ6ZT77 177 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 SLC51BQ86UW2 128 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 ZNF251Q9BRH9 671 aa11.96□□□□□ -0.49
SMC6-201ENST00000351948 RFPL4AA6NLU0 287 aa11.96□□□□□ -0.5
SMC6-201ENST00000351948 RFPL4AL1F8VTS6 287 aa11.96□□□□□ -0.5
SMC6-201ENST00000351948 ERGIC1Q969X5 290 aa11.96□□□□□ -0.5
SMC6-201ENST00000351948 CHST5Q9GZS9 411 aa11.96□□□□□ -0.5
SMC6-201ENST00000351948 MIXL1Q9H2W2 232 aa11.96□□□□□ -0.5
SMC6-201ENST00000351948 ONECUT2O95948 504 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 HAND1O96004 215 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 UCP2P55851 309 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 FAM219AQ8IW50 185 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 RPEQ96AT9 228 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 ZNF703Q9H7S9 590 aaPredicted RBP11.95□□□□□ -0.5
SMC6-201ENST00000351948 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
SMC6-201ENST00000351948 KLK2P20151 261 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 RPL12P30050 165 aaKnown RBP11.95□□□□□ -0.5
SMC6-201ENST00000351948 SNAI3Q3KNW1 292 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 SLC25A47Q6Q0C1 308 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 IL34Q6ZMJ4 242 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 RELL2Q8NC24 303 aaPredicted RBP11.95□□□□□ -0.5
SMC6-201ENST00000351948 ZBTB44Q8NCP5 570 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 RAB1CQ92928 201 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 SLC17A5Q9NRA2 495 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 AK3Q9UIJ7 227 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 ATP6V1G2-DDX39BF2Z307 99 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 PDZK1IP1Q13113 114 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 NFAM1Q8NET5 270 aaPredicted RBP11.95□□□□□ -0.5
SMC6-201ENST00000351948 SSX3Q99909 188 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 CACNA1DQ01668 2161 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 TXNDC12O95881 172 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 SLC38A6Q8IZM9 456 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 GPX7Q96SL4 187 aaPredicted RBP11.95□□□□□ -0.5
SMC6-201ENST00000351948 GPR27Q9NS67 375 aa11.95□□□□□ -0.5
SMC6-201ENST00000351948 KLF7O75840 302 aaPredicted RBP11.94□□□□□ -0.5
SMC6-201ENST00000351948 RRASP10301 218 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 ARV1Q9H2C2 271 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 ZNF552Q9H707 407 aaPredicted RBP11.94□□□□□ -0.5
SMC6-201ENST00000351948 SOX15O60248 233 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 NDUFB6O95139 128 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 AESQ08117 197 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 PEA15Q15121 130 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 LCN15Q6UWW0 184 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 KCNRGQ8N5I3 272 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 YIPF5Q969M3 257 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 SLC35E1Q96K37 410 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 WDFY2Q96P53 400 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 OR5G3P0C626 314 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms