RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 SEC14L6B5MCN3 397 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 PRODHO43272 600 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 FGF16O43320 207 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 PSPNO60542 156 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 E2F6O75461 281 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 CCNB2O95067 398 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 IGHG2P01859 326 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 IGHA1P01876 353 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 FAM106CPP0CH98 169 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 HSD17B1P14061 328 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 PEX2P28328 305 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 RAB25P57735 213 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 ROM1Q03395 351 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 GRK1Q15835 563 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 COMMD2Q86X83 199 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 RNF152Q8N8N0 203 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 CORO2AQ92828 525 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 CEP19Q96LK0 163 aa12.34□□□□□ -0.43
COPE-202ENST00000349893 SERPINE3A8MV23 424 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 MGST3O14880 152 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 TTRP02766 147 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 MNDAP41218 407 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 MAGEA2P43356 314 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 CDX1P47902 265 aaPredicted RBP12.33□□□□□ -0.44
COPE-202ENST00000349893 P2RX3P56373 397 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 ESRRGP62508 458 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 FHL3Q13643 280 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 PRAMEF5Q5TYX0 476 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 TEX38Q6PEX7 206 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 STPG2Q8N412 459 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 NSMCE2Q96MF7 247 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 CDRT15Q96T59 188 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 GAL3ST2Q9H3Q3 398 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 ZNF286AQ9HBT8 521 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 TAS2R3Q9NYW6 316 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 TAS2R1Q9NYW7 299 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 LAMP5Q9UJQ1 280 aa12.33□□□□□ -0.44
COPE-202ENST00000349893 PRR32B1ATL7 298 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 ARPC2O15144 300 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 ZNF254O75437 659 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 SRSF10O75494 262 aaKnown RBP12.32□□□□□ -0.44
COPE-202ENST00000349893 HAND1O96004 215 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 SLC2A5P22732 501 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 CDK2P24941 298 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 GDNFP39905 211 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 INSL3P51460 131 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 ZNF91Q05481 1191 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 MICAQ29983 383 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 DEFB136Q30KP8 78 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 ZNF829Q3KNS6 432 aaPredicted RBP12.32□□□□□ -0.44
COPE-202ENST00000349893 SLC35D3Q5M8T2 416 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 SLX4IPQ5VYV7 408 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 ZNF679Q8IYX0 411 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 IQCF1Q8N6M8 205 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 OR14K1Q8NGZ2 314 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 TEX47Q8TBZ9 253 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 OTULINQ96BN8 352 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 MROQ9BYG7 248 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 YIPF3Q9GZM5 350 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 CHST6Q9GZX3 395 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 PCDHB16Q9NRJ7 776 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 SIRT4Q9Y6E7 314 aaPredicted RBP12.32□□□□□ -0.44
COPE-202ENST00000349893 KIAA2026Q5HYC2 2103 aa12.32□□□□□ -0.44
COPE-202ENST00000349893 A0A1B0GTI1 187 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 PRR23D1E9PI22 279 aaPredicted RBP12.31□□□□□ -0.44
COPE-202ENST00000349893 CCRL2O00421 344 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 CCDC22O60826 627 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 RPLP1P05386 114 aaKnown RBP12.31□□□□□ -0.44
COPE-202ENST00000349893 PRR23D2P0DMB1 279 aaPredicted RBP12.31□□□□□ -0.44
COPE-202ENST00000349893 OR3A1P47881 315 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 HCCSP53701 268 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 MFGE8Q08431 387 aaPredicted RBP12.31□□□□□ -0.44
COPE-202ENST00000349893 ZNF146Q15072 292 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 ZFAND6Q6FIF0 208 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 LCNL1Q6ZST4 164 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 MEPCEQ7L2J0 689 aaKnown RBP12.31□□□□□ -0.44
COPE-202ENST00000349893 SLC35E3Q7Z769 313 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 TRAPPC6BQ86SZ2 158 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 FOXRED2Q8IWF2 684 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 ENTHD1Q8IYW4 607 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 DRAM1Q8N682 238 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 CADM1Q9BY67 442 aaKnown RBP12.31□□□□□ -0.44
COPE-202ENST00000349893 EDA2RQ9HAV5 297 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 LINC00527Q9UJ94 153 aa12.31□□□□□ -0.44
COPE-202ENST00000349893 PLECQ15149 4684 aaKnown RBP12.3□□□□□ -0.44
COPE-202ENST00000349893 IGKV1-27A0A075B6S5 117 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 TRGV10A0A0A0MS01 117 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 FAM172BPA6NC97 362 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 GABRR1P24046 479 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 PRRX1P54821 245 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 FOXE3Q13461 319 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 ZNF260Q3ZCT1 412 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 Q8IYB0 196 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 ELMOD2Q8IZ81 293 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 SLAMF9Q96A28 289 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 NIPSNAP1Q9BPW8 284 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 ZMAT4Q9H898 229 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 MOB1AQ9H8S9 216 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 IL36RNQ9UBH0 155 aa12.3□□□□□ -0.44
COPE-202ENST00000349893 U3KQV3 271 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms