RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CTSDP07339 412 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-203ENST00000349748 RPS4Y1P22090 263 aaKnown RBP9.32□□□□□ -0.92
CAPN3-203ENST00000349748 GPM6BQ13491 265 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 RUNX2Q13950 521 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 ARL6IP1Q15041 203 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 MEP1BQ16820 701 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 CADM4Q8NFZ8 388 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 OR5H2Q8NGV7 314 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 CMTM2Q8TAZ6 248 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 ZNF596Q8TC21 504 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 GPR146Q96CH1 333 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 RSPRY1Q96DX4 576 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 ST6GALNAC5Q9BVH7 336 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 MAP1LC3BQ9GZQ8 125 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 LPAR5Q9H1C0 372 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 IGFLR1Q9H665 355 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 KIR3DX1Q9H7L2 352 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 LRIT1Q9P2V4 623 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 SLC45A2Q9UMX9 530 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 FIGNL2A6NMB9 653 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 H7BYZ3 331 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 CCL16O15467 120 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 NUDT21O43809 227 aaKnown RBP9.32□□□□□ -0.92
CAPN3-203ENST00000349748 HYPMO75409 117 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 C8AP07357 584 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 DNASE1L1P49184 302 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 COMPP49747 757 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-203ENST00000349748 CLDN17P56750 224 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 SPATA45Q537H7 98 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 FAM180AQ6UWF9 173 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 D2HGDHQ8N465 521 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 DTWD2Q8NBA8 298 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 OR5D18Q8NGL1 313 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 OVCA2Q8WZ82 227 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 KTI12Q96EK9 354 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-203ENST00000349748 OR5B12Q96R08 314 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 AIF1LQ9BQI0 150 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 ZNF665Q9H7R5 613 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 PATZ1Q9HBE1 687 aaKnown RBP9.32□□□□□ -0.92
CAPN3-203ENST00000349748 MANBALQ9NQG1 85 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 SLC5A6Q9Y289 635 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 LRP12Q9Y561 859 aa9.32□□□□□ -0.92
CAPN3-203ENST00000349748 DNAH14Q0VDD8 3507 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 CEACAM18A8MTB9 384 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 GDF9O60383 454 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 SAP30O75446 220 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 H2BFMP0C1H6 154 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 TNFSF4P23510 183 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 HYAL1Q12794 435 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 SP5Q6BEB4 398 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-203ENST00000349748 MARCH3Q86UD3 253 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 MRPL43Q8N983 215 aaKnown RBP9.31□□□□□ -0.92
CAPN3-203ENST00000349748 SMIM12Q96EX1 92 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 CLN8Q9UBY8 286 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 WIPI2Q9Y4P8 454 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 NUP210Q8TEM1 1887 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-203ENST00000349748 COL4A6Q14031 1691 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 TRAV30A0A087WSZ9 112 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 FAM24AA6NFZ4 105 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 M0R296 226 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 NRG2O14511 850 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-203ENST00000349748 RAD51DO75771 328 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 EFEMP2O95967 443 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 IGFBP3P17936 291 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-203ENST00000349748 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 FBXW12Q6X9E4 464 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 Q6ZNB5 142 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 CPEB2Q7Z5Q1 589 aaKnown RBP9.31□□□□□ -0.92
CAPN3-203ENST00000349748 ST6GALNAC3Q8NDV1 305 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 OR52M1Q8NGK5 317 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 TMEM171Q8WVE6 324 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 ZNF764Q96H86 408 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-203ENST00000349748 BTF3L4Q96K17 158 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 HCFC1R1Q9NWW0 138 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 KLHL13Q9P2N7 655 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 B3GALT5Q9Y2C3 310 aa9.31□□□□□ -0.92
CAPN3-203ENST00000349748 ODAMA1E959 279 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 ERI3O43414 337 aaKnown RBP9.3□□□□□ -0.92
CAPN3-203ENST00000349748 VSIG8P0DPA2 414 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 AMY2BP19961 511 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 TCN2P20062 427 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 PRLHRP49683 370 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 EWSR1Q01844 656 aaKnown RBP eCLIP9.3□□□□□ -0.92
CAPN3-203ENST00000349748 VAX1Q5SQQ9 334 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 ZAR1Q86SH2 424 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 OR4N5Q8IXE1 308 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 FAM3CQ92520 227 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 PTX4Q96A99 478 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 GPR84Q9NQS5 396 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 C5orf42Q9H799 3197 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 ZNF814B7Z6K7 855 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 CDS2O95674 445 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 RAB38P57729 211 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 PLAC9Q5JTB6 97 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 GPR157Q5UAW9 335 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 ERN2Q76MJ5 926 aaKnown RBP9.3□□□□□ -0.92
CAPN3-203ENST00000349748 RNF144BQ7Z419 303 aa9.3□□□□□ -0.92
CAPN3-203ENST00000349748 RBMXL1Q96E39 390 aaKnown RBP9.3□□□□□ -0.92
CAPN3-203ENST00000349748 Q9N2K0 584 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms