RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 WNT2P09544 360 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 CCL1P22362 96 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 RFX2P48378 723 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 SRP9P49458 86 aaKnown RBP13.4□□□□□ -0.26
RAB5C-201ENST00000346213 OR8B8Q15620 311 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 HACD4Q5VWC8 232 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 ZNF841Q6ZN19 808 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 GCSAMQ8N6F7 178 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 HPSE2Q8WWQ2 592 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 RAB39BQ96DA2 213 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 SLC25A38Q96DW6 304 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 SOX21Q9Y651 276 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-201ENST00000346213 A6NIN4 97 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 IGLV3-1P01715 115 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 TFF1P04155 84 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 DDOSTP39656 456 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 MDH2P40926 338 aaKnown RBP13.4□□□□□ -0.26
RAB5C-201ENST00000346213 SFRP4Q6FHJ7 346 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-201ENST00000346213 NRARPQ7Z6K4 114 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 SERPINA12Q8IW75 414 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 OR51E1Q8TCB6 317 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 FGGYQ96C11 551 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 PGAM5Q96HS1 289 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 SLC22A4Q9H015 551 aa13.4□□□□□ -0.26
RAB5C-201ENST00000346213 C11orf54Q9H0W9 315 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-201ENST00000346213 A8MXK9 166 aa13.39□□□□□ -0.27
RAB5C-201ENST00000346213 TPPPO94811 219 aa13.39□□□□□ -0.27
RAB5C-201ENST00000346213 S100A1P23297 94 aa13.39□□□□□ -0.27
RAB5C-201ENST00000346213 RAB11BQ15907 218 aa13.39□□□□□ -0.27
RAB5C-201ENST00000346213 KLF17Q5JT82 389 aaPredicted RBP13.39□□□□□ -0.27
RAB5C-201ENST00000346213 CELF2-AS1Q8N7Q2 184 aa13.39□□□□□ -0.27
RAB5C-201ENST00000346213 NKAIN3Q8N8D7 197 aa13.39□□□□□ -0.27
RAB5C-201ENST00000346213 DTX3Q8N9I9 347 aa13.39□□□□□ -0.27
RAB5C-201ENST00000346213 RFT1Q96AA3 541 aa13.39□□□□□ -0.27
RAB5C-201ENST00000346213 FOXRED1Q96CU9 486 aaPredicted RBP13.39□□□□□ -0.27
RAB5C-201ENST00000346213 S100A16Q96FQ6 103 aaKnown RBP13.39□□□□□ -0.27
RAB5C-201ENST00000346213 THAP7Q9BT49 309 aaPredicted RBP13.39□□□□□ -0.27
RAB5C-201ENST00000346213 C1orf123Q9NWV4 160 aa13.39□□□□□ -0.27
RAB5C-201ENST00000346213 A0A0U1RQV5 110 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 LINC00854A0A1B0GVQ3 168 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 SULT1B1O43704 296 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 GSTZ1O43708 216 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-201ENST00000346213 VENTXO95231 258 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 GRPP07492 148 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 MNDAP41218 407 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 INPP1P49441 399 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 ZNF154Q13106 437 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 C1orf100Q5SVJ3 147 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 ZNF529Q6P280 563 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 DOK3Q7L591 496 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 LYPD6Q86Y78 171 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 PLPP7Q8NBV4 271 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 OR5D14Q8NGL3 314 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 TRIM63Q969Q1 353 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 SLC25A28Q96A46 364 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 GPR84Q9NQS5 396 aa13.38□□□□□ -0.27
RAB5C-201ENST00000346213 POLR3KQ9Y2Y1 108 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-201ENST00000346213 IGHV3OR15-7A0A075B7D8 119 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 C22orf46C9J442 243 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 GMDSO60547 372 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 LHBP01229 141 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 AMY2BP19961 511 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 BDKRB2P30411 391 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 DCAF12L2Q5VW00 463 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 MZT2BQ6NZ67 158 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 Q6ZSR3 168 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 PEG10Q86TG7 708 aaKnown RBP13.37□□□□□ -0.27
RAB5C-201ENST00000346213 CADM3Q8N126 398 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 SPICQ8N5J4 248 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 BOLLQ8N9W6 283 aaKnown RBP13.37□□□□□ -0.27
RAB5C-201ENST00000346213 CCDC54Q8NEL0 328 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 OR51D1Q8NGF3 324 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 OR51A2Q8NGJ7 313 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 OR6M1Q8NGM8 313 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 ADAT3Q96EY9 351 aaPredicted RBP13.37□□□□□ -0.27
RAB5C-201ENST00000346213 OR10A2Q9H208 303 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 PPIAL4EA0A075B759 164 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 RNF212BA8MTL3 300 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 PPIAL4DF5H284 164 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 LANCL1O43813 399 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 PPIAL4FP0DN26 164 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 HNF1AP20823 631 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 HTR2CP28335 458 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 SRP14P37108 136 aaKnown RBP13.37□□□□□ -0.27
RAB5C-201ENST00000346213 MAP2K3P46734 347 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 C2orf76Q3KRA6 126 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 C1QL2Q7Z5L3 287 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 FAM90A1Q86YD7 464 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 SEMA6DQ8NFY4 1073 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 OR1M1Q8NGA1 313 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 OR52H1Q8NGJ2 320 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 OR14K1Q8NGZ2 314 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 C15orf40Q8WUR7 153 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 C22orf15Q8WYQ4 148 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 FAM3DQ96BQ1 224 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 NEDD4LQ96PU5 975 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 RBFOX1Q9NWB1 397 aaKnown RBP13.37□□□□□ -0.27
RAB5C-201ENST00000346213 MRPS7Q9Y2R9 242 aaKnown RBP13.37□□□□□ -0.27
RAB5C-201ENST00000346213 PPIAL4AQ9Y536 164 aa13.37□□□□□ -0.27
RAB5C-201ENST00000346213 INSIG2Q9Y5U4 225 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms