RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SERF2P84101 59 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 FMODQ06828 376 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 DHRS11Q6UWP2 260 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 BSCL2Q96G97 398 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-203ENST00000343508 TMEM9BQ9NQ34 198 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 CLCF1Q9UBD9 225 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF729A6NN14 1252 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-203ENST00000343508 J3QR89 54 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 TNFSF11O14788 317 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 MMP7P09237 267 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-203ENST00000343508 ARL3P36405 182 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 TMEM211Q6ICI0 200 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 FBXO17Q96EF6 278 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 BCAT2O15382 392 aaPredicted RBP4.24□□□□□ -1.73
CSMD3-203ENST00000343508 RRP8O43159 456 aaKnown RBP4.24□□□□□ -1.73
CSMD3-203ENST00000343508 CA3P07451 260 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 SELEP16581 610 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 PTTG1IPP53801 180 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 SKP2Q13309 424 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 OR5AU1Q8NGC0 362 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 TAAR6Q96RI8 345 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 TRIB1Q96RU8 372 aa4.24□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF106Q9H2Y7 1883 aaKnown RBP4.24□□□□□ -1.73
CSMD3-203ENST00000343508 C5orf49A4QMS7 147 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 SPRY1O43609 319 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 PPYP01298 95 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 PRF1P14222 555 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 TNFSF4P23510 183 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 OTX2P32243 289 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 NHLH2Q02577 135 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 RPEL1Q2QD12 228 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 FFAR4Q5NUL3 377 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 DGAT2L6Q6ZPD8 337 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 TMPRSS7Q7RTY8 843 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 APOBEC4Q8WW27 367 aaKnown RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 NTN1O95631 604 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 GPR3P46089 330 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 EIF3IQ13347 325 aaKnown RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 FDX2Q6P4F2 183 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 WDR73Q6P4I2 378 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 OR6X1Q8NH79 312 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 A0A087WWC5 75 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 HSBP1O75506 76 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 FOLR2P14207 255 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 GLULP15104 373 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 CRISP2P16562 243 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 RCC1P18754 421 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 FABP6P51161 128 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 NKAIN1Q4KMZ8 207 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF468Q5VIY5 522 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 TAAR3PQ9P1P4 343 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 TBX21Q9UL17 535 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ALPK3Q96L96 1907 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 C5orf52A6NGY3 159 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 LILRA5A6NI73 299 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 K7EQM0 130 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 DNASE2O00115 360 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 TIGITQ495A1 244 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 OTPQ5XKR4 325 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 TBC1D26Q86UD7 250 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 SPPL3Q8TCT6 385 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 MTCH1Q9NZJ7 389 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 TRBV5-7A0A0A0MS05 114 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 A0A0G2JK05 382 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 A0A0U1RQV5 110 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 FAM221AA4D161 298 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 H0Y8G0 127 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 SIGLEC5O15389 551 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 PDCD6O75340 191 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 HOXB3P14651 431 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 SIGLEC14Q08ET2 396 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF321PQ8N8H1 164 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 OR5B3Q8NH48 314 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 CMTM2Q8TAZ6 248 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 EDARADDQ8WWZ3 215 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 EXTL1Q92935 676 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 WNT2BQ93097 391 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 KLHDC2Q9Y2U9 406 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 UTRNP46939 3433 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ARID1BQ8NFD5 2236 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 FCN1O00602 326 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ZIC2O95409 532 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 TRGC2P03986 189 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 HNF1AP20823 631 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 UBE2G1P62253 170 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 DUSP2Q05923 314 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 PRSS53Q2L4Q9 553 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 Q8IYB0 196 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 RBMXL3Q8N7X1 1067 aaKnown RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 RGP1Q92546 391 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ABHD14BQ96IU4 210 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 PCNTO95613 3336 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 IGKV1-8A0A0C4DH67 115 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ACTL6AO96019 429 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 EN2P19622 333 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-203ENST00000343508 ZP4Q12836 540 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 LILRA6Q6PI73 481 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 HIST1H2BAQ96A08 127 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 FAM24AA6NFZ4 105 aa4.23□□□□□ -1.73
CSMD3-203ENST00000343508 CRYM-AS1A6NIL9 109 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms