RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 BHLHE23Q8NDY6 225 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 SLC6A7Q99884 636 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 FAM173AQ9BQD7 235 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 TUBA4BQ9H853 241 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 SLC16A7O60669 478 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 MBPP02686 304 aaPredicted RBP13.18□□□□□ -0.3
BRAT1-201ENST00000340611 TRGC2P03986 189 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 FCGR3AP08637 254 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 CTLA4P16410 223 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 SRD5A2P31213 254 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 DVL1P1P54792 670 aaPredicted RBP13.18□□□□□ -0.3
BRAT1-201ENST00000340611 RRADP55042 308 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 ACTBP60709 375 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 ACTG1P63261 375 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 HSF1Q00613 529 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 SAPCD1Q5SSQ6 148 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 HEPN1Q6WQI6 88 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 TMEM251Q8N6I4 163 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 RAB24Q969Q5 203 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF703Q9H7S9 590 aaPredicted RBP13.18□□□□□ -0.3
BRAT1-201ENST00000340611 ALKBH4Q9NXW9 302 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 LOC100289279A0A1B0GTE1 492 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 XKRYO14609 159 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 CA11O75493 328 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 EIF1AXP47813 144 aaKnown RBP13.17□□□□□ -0.3
BRAT1-201ENST00000340611 Q6ZRG5 221 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 OR13C8Q8NGS7 320 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 TXNIPQ9H3M7 391 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 CYTL1Q9NRR1 136 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 ATRXP46100 2492 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 TLN1Q9Y490 2541 aaKnown RBP13.17□□□□□ -0.3
BRAT1-201ENST00000340611 NPIPA5E9PKD4 350 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 MKRN2OSH3BPM6 223 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 TMEM127O75204 238 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 HLA-DQA2P01906 255 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 RPS23P62266 143 aaKnown RBP13.17□□□□□ -0.3
BRAT1-201ENST00000340611 MOGAT2Q3SYC2 334 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF766Q5HY98 468 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 ASPHD2Q6ICH7 369 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 CDC20BQ86Y33 519 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF519Q8TB69 540 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 KCNG2Q9UJ96 466 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 BOKQ9UMX3 212 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-201ENST00000340611 NPIPA1Q9UND3 350 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 VSIG4Q9Y279 399 aa13.17□□□□□ -0.3
BRAT1-201ENST00000340611 CHD3Q12873 2000 aaKnown RBP13.17□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF736B4DX44 427 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-201ENST00000340611 CXCL13O43927 109 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 CYB5AP00167 134 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 MRPS11P82912 194 aaKnown RBP13.16□□□□□ -0.3
BRAT1-201ENST00000340611 MFAP5Q13361 173 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 PPP1R1AQ13522 171 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 EIF2B1Q14232 305 aaKnown RBP13.16□□□□□ -0.3
BRAT1-201ENST00000340611 SLC10A1Q14973 349 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 MCHR2Q969V1 340 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 TMEM212A6NML5 194 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 FAM157AC9JC47 383 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 CXCL1P09341 107 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF735P0CB33 412 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 BATFQ16520 125 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 GLYATL3Q5SZD4 288 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 GGNQ86UU5 652 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 EXD3Q8N9H8 876 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 TMEM104Q8NE00 496 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 MITD1Q8WV92 249 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 ASB17Q8WXJ9 295 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 MALSU1Q96EH3 234 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 C4orf45Q96LM5 186 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 SLC25A21Q9BQT8 299 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-201ENST00000340611 CST11Q9H112 138 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 PRSS37A4D1T9 235 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF891A8MT65 544 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-201ENST00000340611 SLC17A2O00624 439 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 NME2P1O60361 137 aa13.16□□□□□ -0.3
BRAT1-201ENST00000340611 ARSJQ5FYB0 599 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-201ENST00000340611 ZSCAN4Q8NAM6 433 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF385AQ96PM9 386 aaKnown RBP13.16□□□□□ -0.3
BRAT1-201ENST00000340611 CYB5BO43169 146 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 CNOT4O95628 575 aaKnown RBP13.15□□□□□ -0.3
BRAT1-201ENST00000340611 ALOX5APP20292 161 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 SERPINF1P36955 418 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 TNFSF10P50591 281 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 RAC1P63000 192 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 SLC22A6Q4U2R8 563 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 NCR3LG1Q68D85 454 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 TMEM229BQ8NBD8 167 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 ASB10Q8WXI3 467 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 ELOVL3Q9HB03 270 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 COA3Q9Y2R0 106 aaPredicted RBP13.15□□□□□ -0.3
BRAT1-201ENST00000340611 FBXO7Q9Y3I1 522 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 RELNP78509 3460 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF432O94892 652 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 RENP00797 406 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 MDKP21741 143 aaPredicted RBP13.15□□□□□ -0.3
BRAT1-201ENST00000340611 RPL7L1Q6DKI1 246 aaKnown RBP13.15□□□□□ -0.3
BRAT1-201ENST00000340611 ANGPTL5Q86XS5 388 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 ASB13Q8WXK3 278 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 B3GALT5Q9Y2C3 310 aa13.15□□□□□ -0.3
BRAT1-201ENST00000340611 TGIF2-C20orf24A0A0A6YYL0 155 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 F8VVB4 439 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms