RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZNF239Q16600 458 aaKnown RBP5.51□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF468Q5VIY5 522 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-202ENST00000338368 FAHD2BQ6P2I3 314 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-202ENST00000338368 RBMS3Q6XE24 437 aaKnown RBP5.51□□□□□ -1.53
PRKDC-202ENST00000338368 FAM58AQ8N1B3 248 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 FAHD2AQ96GK7 314 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 FAM234AQ9H0X4 552 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 SEMA5BQ9P283 1151 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 PLXNB3Q9ULL4 1909 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 COL4A6Q14031 1691 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 H3BP45 60 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 MPC2O95563 127 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 MPGP29372 298 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 C10orf128Q5T292 105 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 SVBPQ8N300 66 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF441Q8N8Z8 693 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 NPAS1Q99742 590 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 RPS10P5Q9NQ39 176 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 STARD10Q9Y365 291 aa5.51□□□□□ -1.53
PRKDC-202ENST00000338368 GPR31O00270 319 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 S100PP25815 95 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 DHODHQ02127 395 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 FOXC1Q12948 553 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 RGS7BPQ6MZT1 257 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-202ENST00000338368 KLF7O75840 302 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-202ENST00000338368 DFFBO76075 338 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF205O95201 554 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 TLE4Q04727 773 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF529Q6P280 563 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 OR13G1Q8NGZ3 307 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 KCNK7Q9Y2U2 307 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 OR5B21A6NL26 309 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 OR8B8Q15620 311 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 SLC25A53Q5H9E4 307 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 STPG1Q5TH74 334 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 SKA3Q8IX90 412 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 HEYLQ9NQ87 328 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-202ENST00000338368 GPR132Q9UNW8 380 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 PRR32B1ATL7 298 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 IFNA4P05014 189 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 SURF2Q15527 256 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-202ENST00000338368 FBXW9Q5XUX1 488 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 SAV1Q9H4B6 383 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-202ENST00000338368 PPP1R3CQ9UQK1 317 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 VSIG10L2P0DP72 767 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 S100A2P29034 98 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 LGALSLQ3ZCW2 172 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-202ENST00000338368 KRBOX4Q5JUW0 171 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 CXorf67Q86X51 503 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-202ENST00000338368 TMEM105Q8N8V8 129 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 MAGT1Q9H0U3 335 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 ZNHIT1O43257 154 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 AKR1C1Q04828 323 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 C19orf57Q0VDD7 668 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 PDZK1IP1Q13113 114 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 COL19A1Q14993 1142 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 Q6ZRG5 221 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 HES7Q9BYE0 225 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 IFNA10P01566 189 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 FTH1P19P0C7X4 201 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 PRF1P14222 555 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 OR8G2PQ6IF36 304 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 H3F3CQ6NXT2 135 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 HOGA1Q86XE5 327 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF808Q8N4W9 903 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-202ENST00000338368 OR14K1Q8NGZ2 314 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 BTF3L4Q96K17 158 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 NPDC1Q9NQX5 325 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-202ENST00000338368 RNF150Q9ULK6 438 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 HMSDA8MTL9 139 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 TCTEX1D2Q8WW35 142 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 LGALS8O00214 317 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 NKX2-8O15522 239 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 FAM185AQ8N0U4 392 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 OR5A2Q8NGI9 324 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 H1FXQ92522 213 aaKnown RBP5.5□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF649Q9BS31 505 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 A0A1W2PPV4 95 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 CRHP06850 196 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 NFYBP25208 207 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 IFITM2Q01629 132 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 CLEC18BQ6UXF7 455 aa5.5□□□□□ -1.53
PRKDC-202ENST00000338368 ZIC3O60481 467 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 CTSDP07339 412 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 RFPL3SP0C7P2 107 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 CALCRP30988 508 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 CDCP2Q5VXM1 449 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 RBMXL1Q96E39 390 aaKnown RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 ERRFI1Q9UJM3 462 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 PCDHB10Q9UN67 800 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF883P0CG24 379 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 ZNF14P17017 642 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-202ENST00000338368 F2RL1P55085 397 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 PLAURQ03405 335 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 PIGYQ3MUY2 71 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 Q8IYB0 196 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 MITD1Q8WV92 249 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 MS4A3Q96HJ5 214 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 SIGLEC12Q96PQ1 595 aa5.49□□□□□ -1.53
PRKDC-202ENST00000338368 MRPL13Q9BYD1 178 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms