RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.44□□□□□ -0.42
CBX3-201ENST00000337620 ZDHHC8Q9ULC8 765 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 UBE2QL1A1L167 161 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A10PA6NDY2 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A18PA6NE21 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A16PA6NEW6 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A20PA6NIJ5 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A8PA6NJQ4 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A7PA6NKC0 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A22PA8MWA6 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A12PA8MX19 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A5PA8MXJ8 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 DEFB108AA8MXU0 73 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A23PA8MXZ1 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 CD3DP04234 171 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A15PP0C7V4 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A13PP0C7W8 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A14PP0C7W9 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 FAM90A24PP0C7X0 464 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 HLA-DMAP28067 261 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 APOBEC3AP31941 199 aaPredicted RBP12.43□□□□□ -0.42
CBX3-201ENST00000337620 RBMXP38159 391 aaKnown RBP12.43□□□□□ -0.42
CBX3-201ENST00000337620 ERVK11-1P61568 191 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 OR4S1Q8NGB4 309 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 ITLN1Q8WWA0 313 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 POM121Q96HA1 1249 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 SULT4A1Q9BR01 284 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 CISD1Q9NZ45 108 aaKnown RBP12.43□□□□□ -0.42
CBX3-201ENST00000337620 PRSS44E7EML9 344 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 TNFSF4P23510 183 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 GIFP27352 417 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 BTCP35070 178 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 RCVRNP35243 200 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 TAS2R19P59542 299 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 MRPS15P82914 257 aaKnown RBP12.43□□□□□ -0.42
CBX3-201ENST00000337620 TNFAIP6P98066 277 aaPredicted RBP12.43□□□□□ -0.42
CBX3-201ENST00000337620 HOXA4Q00056 320 aaPredicted RBP12.43□□□□□ -0.42
CBX3-201ENST00000337620 MPV17LQ2QL34 196 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 SFRP4Q6FHJ7 346 aaPredicted RBP12.43□□□□□ -0.42
CBX3-201ENST00000337620 OR52W1Q6IF63 320 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 POC1AQ8NBT0 407 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 DYRK2Q92630 601 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 AK3Q9UIJ7 227 aa12.43□□□□□ -0.42
CBX3-201ENST00000337620 ZNF736B4DX44 427 aaPredicted RBP12.42□□□□□ -0.42
CBX3-201ENST00000337620 WNT9BO14905 357 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 NOS1APO75052 506 aaPredicted RBP12.42□□□□□ -0.42
CBX3-201ENST00000337620 ACAA1P09110 424 aaPredicted RBP12.42□□□□□ -0.42
CBX3-201ENST00000337620 AKAIN1P0CW23 69 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 SLC6A1P30531 599 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 FAUP35544 74 aaKnown RBP12.42□□□□□ -0.42
CBX3-201ENST00000337620 CCR6P51684 374 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 STEAP1BQ6NZ63 245 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 PLET1Q6UQ28 207 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 MOGAT3Q86VF5 341 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 ZCCHC24Q8N2G6 241 aaKnown RBP12.42□□□□□ -0.42
CBX3-201ENST00000337620 CELF2-AS1Q8N7Q2 184 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 TMEM229BQ8NBD8 167 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 DUSP18Q8NEJ0 188 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 OR4D10Q8NGI6 311 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 FBXW5Q969U6 566 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 HDHD3Q9BSH5 251 aaPredicted RBP12.42□□□□□ -0.42
CBX3-201ENST00000337620 ST6GALNAC5Q9BVH7 336 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 CACNG6Q9BXT2 260 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 WDR13Q9H1Z4 485 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 IL19Q9UHD0 177 aa12.42□□□□□ -0.42
CBX3-201ENST00000337620 ZNF230Q9UIE0 474 aaPredicted RBP12.42□□□□□ -0.42
CBX3-201ENST00000337620 NAP1L6A6NFF2 107 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 M0R233 179 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 HSPB6O14558 160 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 HS3ST1O14792 307 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 PTBP3O95758 552 aaKnown RBP12.41□□□□□ -0.42
CBX3-201ENST00000337620 GLRA1P23415 457 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 IL13RA2Q14627 380 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 LINC00596Q86U02 117 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 OR4C16Q8NGL9 310 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 LILRB1Q8NHL6 650 aaPredicted RBP12.41□□□□□ -0.42
CBX3-201ENST00000337620 LRRC29Q8WV35 223 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 CMSS1Q9BQ75 279 aaKnown RBP12.41□□□□□ -0.42
CBX3-201ENST00000337620 OCSTAMPQ9BR26 566 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 DPAGT1Q9H3H5 408 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 FN3KRPQ9HA64 309 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 CHD3Q12873 2000 aaKnown RBP12.41□□□□□ -0.42
CBX3-201ENST00000337620 C17orf100A8MU93 164 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 PYCARD-AS1I3L0S3 204 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 C19orf84I3L1E1 186 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 M0QYG6 137 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 DEGS1O15121 323 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 TPD52L2O43399 206 aaKnown RBP12.41□□□□□ -0.42
CBX3-201ENST00000337620 CA11O75493 328 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 ZNF44P15621 663 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 LOXP28300 417 aaPredicted RBP12.41□□□□□ -0.42
CBX3-201ENST00000337620 CBX5P45973 191 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 CCL8P80075 99 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 ZNF672Q499Z4 452 aaPredicted RBP12.41□□□□□ -0.42
CBX3-201ENST00000337620 NEK7Q8TDX7 302 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 MAFIPQ8WZ33 124 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 ZNF701Q9NV72 531 aaPredicted RBP12.41□□□□□ -0.42
CBX3-201ENST00000337620 OR14J1Q9UGF5 321 aa12.41□□□□□ -0.42
CBX3-201ENST00000337620 ZNF462Q96JM2 2506 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 FAM221AA4D161 298 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms