RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CADM4Q8NFZ8 388 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 OR14K1Q8NGZ2 314 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 OR13G1Q8NGZ3 307 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 OR2G3Q8NGZ4 309 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 PECRQ9BY49 303 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 CNTNAP3Q9BZ76 1288 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 TREM2Q9NZC2 230 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 ABI3Q9P2A4 366 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 MIOXQ9UGB7 285 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 AK3Q9UIJ7 227 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 KCNMB2Q9Y691 235 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 MGAQ8IWI9 3026 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 TICRRQ7Z2Z1 1910 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 SNAPINO95295 136 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 SLC34A2O95436 690 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 MDKP21741 143 aaPredicted RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 CA6P23280 308 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 HOXA1P49639 335 aaPredicted RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 RAB2AP61019 212 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 SNRPEP62304 92 aaKnown RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 RAB1AP62820 205 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 IGLV3-21P80748 117 aaPredicted RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 ARF1P84077 181 aaKnown RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 FAM189A2Q15884 450 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 ISXQ2M1V0 245 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 ACER2Q5QJU3 275 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 AKR1C8PQ5T2L2 129 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 SLC25A42Q86VD7 318 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 TUSC5Q8IXB3 177 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 NECAP1Q8NC96 275 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 PLPP5Q8NEB5 264 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 OR5AP2Q8NGF4 316 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 OR8U1Q8NH10 309 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 CMTM3Q96MX0 182 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 PIGMQ9H3S5 423 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 MCTS1Q9ULC4 181 aaKnown RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 IGKV3D-11A0A0A0MRZ8 115 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 HMSDA8MTL9 139 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 CELA3AP09093 270 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 SFTA3P0C7M3 94 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 PGA4P0DJD7 388 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 PGA3P0DJD8 388 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 NPBWR1P48145 328 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 UBE2NP61088 152 aaKnown RBP7.19□□□□□ -1.26
HPS4-201ENST00000336873 RUNX1Q01196 453 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 ROM1Q03395 351 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 TEX30Q5JUR7 227 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 FNDC7Q5VTL7 733 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 CMTM1Q8IZ96 169 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 OR6K3Q8NGY3 331 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 C2orf50Q96LR7 162 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 RAB33BQ9H082 229 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 IL36RNQ9UBH0 155 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 LOXL2Q9Y4K0 774 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 ZGRF1Q86YA3 2104 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 C1orf196B1AJZ1 125 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 ACKR3P25106 362 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 APLNRP35414 380 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 MAGEA5P43359 124 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 ZNF92Q03936 586 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 SPANXN5Q5MJ07 72 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 DEFB108BQ8NET1 73 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 OR1F12Q8NHA8 337 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 SCGB1C1Q8TD33 95 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 RXFP4Q8TDU9 374 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 NECAP2Q9NVZ3 263 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 TNFSF18Q9UNG2 199 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 HS3ST3B1Q9Y662 390 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 FTCDNL1E5RQL4 147 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 CBR3O75828 277 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 OR2A4O95047 310 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 SFT2D2O95562 160 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 NGFP01138 241 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 ZBTB25P24278 435 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 NKX2-1P43699 371 aaPredicted RBP7.19□□□□□ -1.26
HPS4-201ENST00000336873 ZNF273Q14593 569 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 JMJD6Q6NYC1 403 aaPredicted RBP7.19□□□□□ -1.26
HPS4-201ENST00000336873 OSR2Q8N2R0 312 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 OR1K1Q8NGR3 316 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 POC1BQ8TC44 478 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 SLC25A43Q8WUT9 341 aaPredicted RBP7.19□□□□□ -1.26
HPS4-201ENST00000336873 MRPS24Q96EL2 167 aaKnown RBP7.19□□□□□ -1.26
HPS4-201ENST00000336873 OR2A7Q96R45 310 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 UTP23Q9BRU9 249 aaKnown RBP7.19□□□□□ -1.26
HPS4-201ENST00000336873 OPA3Q9H6K4 179 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 B3GAT1Q9P2W7 334 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 HDGFL3Q9Y3E1 203 aa7.19□□□□□ -1.26
HPS4-201ENST00000336873 MAP1AP78559 2803 aaPredicted RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 IGHV3-43A0A0B4J1X8 118 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 IGKV1-9A0A0C4DH69 117 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 hCG_1809904A0A1W2PP81 198 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 A0A1W2PR64 198 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 A0A1W2PRV1 198 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 TERTO14746 1132 aaKnown RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 ST8SIA3O43173 380 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 GATCO43716 136 aaKnown RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 LYZL6O75951 148 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 CER1O95813 267 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 ACTL6AO96019 429 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 IGHV3-43DP0DP04 118 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 781.3 ms