RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 RIIAD1A6NNX1 92 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 F2RP25116 425 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 GPM6AP51674 278 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 CCL23P55773 120 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 ZNF266Q14584 549 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 PDGFRLQ15198 375 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 ADAD2Q8NCV1 583 aaKnown RBP7.56□□□□□ -1.2
TDP1-201ENST00000335725 OR10X1Q8NGY0 326 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 OR2AJ1Q8NGZ0 328 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 OR4K13Q8NH42 304 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 FBRSQ9HAH7 460 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 SERTAD3Q9UJW9 196 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 LOC102723971A0A1B0GUV8 181 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 NPIPB15A6NHN6 443 aaPredicted RBP7.56□□□□□ -1.2
TDP1-201ENST00000335725 LILRA1O75019 489 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 ZNF253O75346 499 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 FTH1P19P0C7X4 201 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 MMP9P14780 707 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 FRKP42685 505 aaPredicted RBP7.56□□□□□ -1.2
TDP1-201ENST00000335725 FXYD6P3P58550 94 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 CCL20P78556 96 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 SRSF6Q13247 344 aaKnown RBP7.56□□□□□ -1.2
TDP1-201ENST00000335725 FAM90A2PQ658T7 463 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 OR2G3Q8NGZ4 309 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 KISS1RQ969F8 398 aaPredicted RBP7.56□□□□□ -1.2
TDP1-201ENST00000335725 RALGAPA2Q2PPJ7 1873 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 C1QTNF9BB2RNN3 333 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 PRSS56P0CW18 603 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 ASCL1P50553 236 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 RNFT1Q5M7Z0 435 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 TMEM184AQ6ZMB5 413 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 CENPVQ7Z7K6 275 aaPredicted RBP7.55□□□□□ -1.2
TDP1-201ENST00000335725 NECAP1Q8NC96 275 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 NPEPL1Q8NDH3 523 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 OR5A1Q8NGJ0 315 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 SKA2Q8WVK7 121 aaPredicted RBP7.55□□□□□ -1.2
TDP1-201ENST00000335725 CISD1Q9NZ45 108 aaKnown RBP7.55□□□□□ -1.2
TDP1-201ENST00000335725 THYN1Q9P016 225 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 PRSS50Q9UI38 385 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 NUP205Q92621 2012 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 TRPM7Q96QT4 1865 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.55□□□□□ -1.2
TDP1-201ENST00000335725 A0A1W2PR80 420 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 ZC3H12DA2A288 527 aaKnown RBP7.55□□□□□ -1.2
TDP1-201ENST00000335725 CFPP27918 469 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 ID1P41134 155 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 GFRA1P56159 465 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 MTCP1P56278 107 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 IAH1Q2TAA2 248 aaPredicted RBP7.55□□□□□ -1.2
TDP1-201ENST00000335725 ANKRD55Q3KP44 614 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 STPG1Q5TH74 334 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 OR4N2Q8NGD1 307 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 OR52E5Q8NH55 327 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 SLC25A40Q8TBP6 338 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 WDYHV1Q96HA8 205 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 CHRDL1Q9BU40 450 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 DUSP23Q9BVJ7 150 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 NGBQ9NPG2 151 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 MRPS28Q9Y2Q9 187 aaKnown RBP7.55□□□□□ -1.2
TDP1-201ENST00000335725 SIP14410 1827 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 UPK3BL1B0FP48 263 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 UPK3BL2E5RIL1 263 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 MPC1LP0DKB6 136 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 CD33P20138 364 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 SERPINA4P29622 427 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 SMAD3P84022 425 aaKnown RBP7.55□□□□□ -1.2
TDP1-201ENST00000335725 GABRA6Q16445 453 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 C5orf47Q569G3 176 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 CARD17Q5XLA6 110 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 MRPL54Q6P161 138 aaKnown RBP7.55□□□□□ -1.2
TDP1-201ENST00000335725 OR10P1Q8NGE3 313 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 EID2BQ96D98 161 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 UBE2ZQ9H832 354 aaPredicted RBP7.55□□□□□ -1.2
TDP1-201ENST00000335725 MED20Q9H944 212 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 GPR84Q9NQS5 396 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 DECR2Q9NUI1 292 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 HHLA2Q9UM44 414 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 WASHC3Q9Y3C0 194 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 PXMP4Q9Y6I8 212 aa7.55□□□□□ -1.2
TDP1-201ENST00000335725 IGSF23A1L1A6 192 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 FIGNL2A6NMB9 653 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 S1PR2O95136 353 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 RPL32P62910 135 aaKnown RBP7.54□□□□□ -1.2
TDP1-201ENST00000335725 RUNX1Q01196 453 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 ZP4Q12836 540 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 SLC18B1Q6NT16 456 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 ZNF788Q6ZQV5 615 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 ERASQ7Z444 233 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 SLC35F2Q8IXU6 374 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 CADM4Q8NFZ8 388 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 FAM3DQ96BQ1 224 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 GALMQ96C23 342 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 ZMYND19Q96E35 227 aaPredicted RBP7.54□□□□□ -1.2
TDP1-201ENST00000335725 MS4A4AQ96JQ5 239 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 FCRL2Q96LA5 508 aaPredicted RBP7.54□□□□□ -1.2
TDP1-201ENST00000335725 LRIT1Q9P2V4 623 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 DAPP1Q9UN19 280 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 UBE2J1Q9Y385 318 aaPredicted RBP7.54□□□□□ -1.2
TDP1-201ENST00000335725 GREB1LQ9C091 1923 aaPredicted RBP7.54□□□□□ -1.2
TDP1-201ENST00000335725 FRMPD3Q5JV73 1810 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms