RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 CLEC5AQ9NY25 188 aa9□□□□□ -0.97
CHD3-201ENST00000330494 TRAV39A0A0B4J263 110 aa9□□□□□ -0.97
CHD3-201ENST00000330494 NUDT19A8MXV4 375 aa9□□□□□ -0.97
CHD3-201ENST00000330494 IGKV1D-16P01601 117 aa9□□□□□ -0.97
CHD3-201ENST00000330494 CLPPQ16740 277 aaPredicted RBP9□□□□□ -0.97
CHD3-201ENST00000330494 TSPO2Q5TGU0 170 aa9□□□□□ -0.97
CHD3-201ENST00000330494 NPEPL1Q8NDH3 523 aa9□□□□□ -0.97
CHD3-201ENST00000330494 AKR1E2Q96JD6 320 aa9□□□□□ -0.97
CHD3-201ENST00000330494 ICAM5Q9UMF0 924 aa9□□□□□ -0.97
CHD3-201ENST00000330494 LIPT2A6NK58 231 aa9□□□□□ -0.97
CHD3-201ENST00000330494 RFPL4AA6NLU0 287 aa9□□□□□ -0.97
CHD3-201ENST00000330494 ZNF727A8MUV8 499 aa9□□□□□ -0.97
CHD3-201ENST00000330494 RFPL4AL1F8VTS6 287 aa9□□□□□ -0.97
CHD3-201ENST00000330494 FOXS1O43638 330 aa9□□□□□ -0.97
CHD3-201ENST00000330494 RTP5Q14D33 572 aa9□□□□□ -0.97
CHD3-201ENST00000330494 ATG4DQ86TL0 474 aaPredicted RBP9□□□□□ -0.97
CHD3-201ENST00000330494 ARHGEF39Q8N4T4 335 aa9□□□□□ -0.97
CHD3-201ENST00000330494 OR4D10Q8NGI6 311 aa9□□□□□ -0.97
CHD3-201ENST00000330494 EDARADDQ8WWZ3 215 aa9□□□□□ -0.97
CHD3-201ENST00000330494 LPAR2Q9HBW0 351 aa9□□□□□ -0.97
CHD3-201ENST00000330494 ZNF331Q9NQX6 463 aaPredicted RBP9□□□□□ -0.97
CHD3-201ENST00000330494 GREB1Q4ZG55 1949 aa9□□□□□ -0.97
CHD3-201ENST00000330494 G3V3Q6 166 aa9□□□□□ -0.97
CHD3-201ENST00000330494 BTNL8Q6UX41 500 aa9□□□□□ -0.97
CHD3-201ENST00000330494 SPSB1Q96BD6 273 aa9□□□□□ -0.97
CHD3-201ENST00000330494 CABLES2Q9BTV7 478 aa9□□□□□ -0.97
CHD3-201ENST00000330494 CEP290O15078 2479 aa9□□□□□ -0.97
CHD3-201ENST00000330494 IGKV1-8A0A0C4DH67 115 aa9□□□□□ -0.97
CHD3-201ENST00000330494 RANP62826 216 aaKnown RBP9□□□□□ -0.97
CHD3-201ENST00000330494 ZNF90Q03938 601 aa9□□□□□ -0.97
CHD3-201ENST00000330494 Q56UQ5 140 aa9□□□□□ -0.97
CHD3-201ENST00000330494 NHLRC1Q6VVB1 395 aa9□□□□□ -0.97
CHD3-201ENST00000330494 OR2M7Q8NG81 312 aa9□□□□□ -0.97
CHD3-201ENST00000330494 DOK5Q9P104 306 aa9□□□□□ -0.97
CHD3-201ENST00000330494 TRAV34A0A0B4J273 112 aa9□□□□□ -0.97
CHD3-201ENST00000330494 OPRK1P41145 380 aa9□□□□□ -0.97
CHD3-201ENST00000330494 DHODHQ02127 395 aa9□□□□□ -0.97
CHD3-201ENST00000330494 OR5I1Q13606 314 aa9□□□□□ -0.97
CHD3-201ENST00000330494 PNLIPRP3Q17RR3 467 aa9□□□□□ -0.97
CHD3-201ENST00000330494 MOGAT2Q3SYC2 334 aa9□□□□□ -0.97
CHD3-201ENST00000330494 ABCA7Q8IZY2 2146 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 RPL29P47914 159 aaKnown RBP8.99□□□□□ -0.97
CHD3-201ENST00000330494 RAC3P60763 192 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 INPP5JQ15735 1006 aaPredicted RBP8.99□□□□□ -0.97
CHD3-201ENST00000330494 GAB4Q2WGN9 574 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 TOMM20LQ6UXN7 152 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 OR5B3Q8NH48 314 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 POM121L2Q96KW2 1035 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 MYOZ1Q9NP98 299 aaPredicted RBP8.99□□□□□ -0.97
CHD3-201ENST00000330494 OR3A1P47881 315 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 FABP9Q0Z7S8 132 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 SKP2Q13309 424 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 TMEM128Q5BJH2 165 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 CCDC190Q86UF4 302 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 TCTE3Q8IZS6 198 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 OR13D1Q8NGV5 346 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 NUBPLQ8TB37 319 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 RSRP1Q9BUV0 290 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 TIMM9Q9Y5J7 89 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 POMT1Q9Y6A1 747 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 ANKRD36A6QL64 1941 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 ZNF785A8K8V0 405 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 MPGP29372 298 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 PPP1R1AQ13522 171 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 RPEQ96AT9 228 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 METTL15P1P0C7V9 234 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 LPAR6P43657 344 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 ZNF528Q3MIS6 628 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 ZNF721Q8TF20 911 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 SCN5AQ14524 2016 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 SIPA1L1O43166 1804 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 SOCS1O15524 211 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 OR5AC1P0C628 307 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 SFTA3P0C7M3 94 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 OR6X1Q8NH79 312 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 OR51I2Q9H344 312 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 OR2M3Q8NG83 312 aa8.99□□□□□ -0.97
CHD3-201ENST00000330494 CDX4O14627 284 aaPredicted RBP8.98□□□□□ -0.97
CHD3-201ENST00000330494 GEMIN2O14893 280 aaKnown RBP8.98□□□□□ -0.97
CHD3-201ENST00000330494 ATXN7O15265 892 aaPredicted RBP8.98□□□□□ -0.97
CHD3-201ENST00000330494 CIDEAO60543 219 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 PRSS23O95084 383 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 IL5P05113 134 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 SULT1A3P0DMM9 295 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 SULT1A4P0DMN0 295 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 PCMT1P22061 227 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 GZMKP49863 264 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 ZPLD1Q8TCW7 415 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 WDR13Q9H1Z4 485 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 TINAGQ9UJW2 476 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 RAB5AP20339 215 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 ACSM6Q6P461 480 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 MOGAT3Q86VF5 341 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 MSL2Q9HCI7 577 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 TAAR5O14804 337 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 CT45A10P0DMU9 189 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 TGIF1Q15583 401 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 JMJD6Q6NYC1 403 aaPredicted RBP8.98□□□□□ -0.97
CHD3-201ENST00000330494 MUC20Q8N307 709 aaPredicted RBP8.98□□□□□ -0.97
CHD3-201ENST00000330494 KDF1Q8NAX2 398 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms