RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 RAB25P57735 213 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 RIPPLY1Q0D2K3 151 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 KCTD8Q6ZWB6 473 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 OR2W3Q7Z3T1 314 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 KCTD20Q7Z5Y7 419 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 MKXQ8IYA7 352 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 PIGCQ92535 297 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 TBX5Q99593 518 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 ADI1Q9BV57 179 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 TTTY10Q9BZA0 68 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 HEXA-AS1Q9H8Q6 139 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 RNPEPL1Q9HAU8 725 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 ZNF319Q9P2F9 582 aa11.72□□□□□ -0.53
CTHRC1-201ENST00000330295 LOC100130705A0A1B0GUX0 176 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 A0A1W2PQL4 384 aaPredicted RBP11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 DAPL1A0PJW8 107 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 TMEM210A6NLX4 147 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 NUDT19A8MXV4 375 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 ENTPD6O75354 484 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 CEBPDP49716 269 aaPredicted RBP11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 PRDX4Q13162 271 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 ZDHHC23Q8IYP9 409 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 CCDC54Q8NEL0 328 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 OR51E1Q8TCB6 317 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 LRRC29Q8WV35 223 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 LINC00476Q8WZB0 136 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 C12orf43Q96C57 262 aaKnown RBP11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 SEH1LQ96EE3 360 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 RNFT2Q96EX2 444 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 GPR84Q9NQS5 396 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 SMPD3Q9NY59 655 aaPredicted RBP11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 SLC25A10Q9UBX3 287 aaPredicted RBP11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 ENPP5Q9UJA9 477 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 OR52A1Q9UKL2 312 aa11.71□□□□□ -0.53
CTHRC1-201ENST00000330295 ZNF850A8MQ14 1090 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 SLC25A17O43808 307 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 RPP14O95059 124 aaKnown RBP11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 LPLP06858 475 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 COX7A1P24310 79 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 DYNLT3P51808 116 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 GABPB1Q06547 395 aaPredicted RBP11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 ATPAF1Q5TC12 328 aaPredicted RBP11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 STUMQ69YW2 141 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 ELMOD2Q8IZ81 293 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 PACRGLQ8N7B6 248 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 OR1M1Q8NGA1 313 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 FOXRED1Q96CU9 486 aaPredicted RBP11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 RNF170Q96K19 258 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 DUX3Q96PT4 197 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 MBOAT4Q96T53 435 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 SLC29A1Q99808 456 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 VCXQ9H320 206 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 MRM2Q9UI43 246 aaKnown RBP11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 KMT2AQ03164 3969 aa11.7□□□□□ -0.54
CTHRC1-201ENST00000330295 ABCA13Q86UQ4 5058 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 DNAH10Q8IVF4 4471 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 SEC14L6B5MCN3 397 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 DHRS3O75911 302 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 APOL3O95236 402 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 FADS2O95864 444 aaKnown RBP11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 NDUFB7P17568 137 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 ANOS1P23352 680 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 CAV3P56539 151 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 ACTA2P62736 377 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 GNG3P63215 75 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 ACTG2P63267 376 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 RCN1Q15293 331 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 SSX2Q16385 188 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 DGUOKQ16854 277 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 ZNF684Q5T5D7 378 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 TTC23Q5W5X9 447 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 OSR2Q8N2R0 312 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 ACBD7Q8N6N7 88 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 KLHL30-AS1Q8NEE0 82 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 RHOXF1Q8NHV9 184 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 OR5P3Q8WZ94 311 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 DNTTIP1Q9H147 329 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 FAM118AQ9NWS6 357 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 GNG8Q9UK08 70 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 PIGLQ9Y2B2 252 aa11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 RPL36Q9Y3U8 105 aaKnown RBP11.69□□□□□ -0.54
CTHRC1-201ENST00000330295 DHRS7CA6NNS2 312 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 PRR32B1ATL7 298 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 SLC16A6O15403 523 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 RHBDL1O75783 438 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 TTRP02766 147 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 RPSAP08865 295 aaKnown RBP11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 ACKR3P25106 362 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 AZGP1P25311 298 aaKnown RBP11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 MFGE8Q08431 387 aaPredicted RBP11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 CEACAM21Q3KPI0 293 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 CLVS2Q5SYC1 327 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 EGFL6Q8IUX8 553 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 SETD9Q8NE22 299 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 OR5T2Q8NGG2 359 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 OR5A2Q8NGI9 324 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 OR5M8Q8NGP6 311 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 ZNF671Q8TAW3 534 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 MALSU1Q96EH3 234 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms