RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 PNRC1Q12796 327 aaPredicted RBP11.13□□□□□ -0.63
CCDC60-201ENST00000327554 ODF3L1Q8IXM7 274 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 SLC35G3Q8N808 338 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 NOXO1Q8NFA2 376 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 ADGRG7Q96K78 797 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 SYT3Q9BQG1 590 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 B3GALT1Q9Y5Z6 326 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 PROB1E7EW31 1015 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 HSPA12AO43301 675 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 ONECUT2O95948 504 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 NUBP1P53384 320 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 FXYD4P59646 89 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 TANGO2Q6ICL3 276 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 FAM57BQ71RH2 274 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 CPEB2Q7Z5Q1 589 aaKnown RBP11.13□□□□□ -0.63
CCDC60-201ENST00000327554 OR10A7Q8NGE5 316 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 OR11L1Q8NGX0 322 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 CABLES2Q9BTV7 478 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 PNRC2Q9NPJ4 139 aaKnown RBP11.13□□□□□ -0.63
CCDC60-201ENST00000327554 LANCL2Q9NS86 450 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 NECAP2Q9NVZ3 263 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 PLEKHJ1Q9NW61 149 aa11.13□□□□□ -0.63
CCDC60-201ENST00000327554 ETV2O00321 342 aaPredicted RBP11.12□□□□□ -0.63
CCDC60-201ENST00000327554 TNFRSF10CO14798 259 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 OPN1MWP04001 364 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 OPN1MW2P0DN77 364 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 OPN1MW3P0DN78 364 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 RAB11AP62491 216 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 TLE3Q04726 772 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 PLCXD2Q0VAA5 305 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 EIF3IQ13347 325 aaKnown RBP11.12□□□□□ -0.63
CCDC60-201ENST00000327554 SLC25A26Q70HW3 274 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 GPR137CQ8N3F9 429 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 TMEM252Q8N6L7 170 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 OR5C1Q8NGR4 320 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 TSLPQ969D9 159 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 R3HDM4Q96D70 268 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 MRPL13Q9BYD1 178 aaKnown RBP11.12□□□□□ -0.63
CCDC60-201ENST00000327554 SRD5A3Q9H8P0 318 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 PLEKHF2Q9H8W4 249 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 SDF2L1Q9HCN8 221 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 CHST11Q9NPF2 352 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 POLR1DQ9Y2S0 133 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 PIAS3Q9Y6X2 628 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 NKX2-6A6NCS4 301 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 ZNF850A8MQ14 1090 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 HBE1P02100 147 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 TK1P04183 234 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 APODP05090 189 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 CELA2BP08218 269 aaPredicted RBP11.12□□□□□ -0.63
CCDC60-201ENST00000327554 OR4A8P0C604 315 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 CEACAM1P13688 526 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 RAB4AP20338 218 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 OPRM1P35372 400 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 OR1D4P47884 311 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 TLE4Q04727 773 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 HNF4GQ14541 408 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 NKAIN1Q4KMZ8 207 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 DTX1Q86Y01 620 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 CMTM1Q8IZ96 169 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 TMEM123Q8N131 208 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 C17orf78Q8N4C9 275 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 OR2AJ1Q8NGZ0 328 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 SPPL3Q8TCT6 385 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 FGF14Q92915 247 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 GNPNAT1Q96EK6 184 aaPredicted RBP11.12□□□□□ -0.63
CCDC60-201ENST00000327554 LYZL4Q96KX0 146 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 Q96M66 194 aa11.12□□□□□ -0.63
CCDC60-201ENST00000327554 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
CCDC60-201ENST00000327554 SHANK1Q9Y566 2161 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 RER1O15258 196 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 PHF1O43189 567 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-201ENST00000327554 PGA3P0DJD8 388 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 CDAP32320 146 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 DYNLT3P51808 116 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 TDGF1P3P51864 188 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 MFAP5Q13361 173 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 C21orf62-AS1Q17RA5 79 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 TP53RKQ96S44 253 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 NUDT22Q9BRQ3 303 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 FAAP24Q9BTP7 215 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 ELL3Q9HB65 397 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-201ENST00000327554 ZNF581Q9P0T4 197 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 NCOA6Q14686 2063 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-201ENST00000327554 TRAV1-1A0A0B4J248 108 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 SOX15O60248 233 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 CDS2O95674 445 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 MBP02144 154 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 FCGR2AP12318 317 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 ZNF25P17030 456 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-201ENST00000327554 ZNF133P52736 654 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-201ENST00000327554 P2RY6Q15077 328 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 ARMC6Q6NXE6 501 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 MAML2Q8IZL2 1156 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-201ENST00000327554 SUMF1Q8NBK3 374 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 HIST1H2AAQ96QV6 131 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 PYGO2Q9BRQ0 406 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 ANGPTL4Q9BY76 406 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 CERS4Q9HA82 394 aa11.11□□□□□ -0.63
CCDC60-201ENST00000327554 GNG13Q9P2W3 67 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms