RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 TEX13DA0A0J9YY54 714 aaPredicted RBP12.71□□□□□ -0.38
CLK4-201ENST00000316308 ARGFXA6NJG6 315 aa12.71□□□□□ -0.38
CLK4-201ENST00000316308 FUT6P51993 359 aa12.71□□□□□ -0.38
CLK4-201ENST00000316308 RAB1AP62820 205 aa12.71□□□□□ -0.38
CLK4-201ENST00000316308 SPATA46Q5T0L3 261 aa12.71□□□□□ -0.38
CLK4-201ENST00000316308 TMEM164Q5U3C3 297 aa12.71□□□□□ -0.38
CLK4-201ENST00000316308 COLCA1Q6ZS62 124 aa12.71□□□□□ -0.38
CLK4-201ENST00000316308 IL22RA1Q8N6P7 574 aa12.71□□□□□ -0.38
CLK4-201ENST00000316308 ASF1BQ9NVP2 202 aa12.71□□□□□ -0.38
CLK4-201ENST00000316308 TAS2R3Q9NYW6 316 aa12.71□□□□□ -0.38
CLK4-201ENST00000316308 LHX6Q9UPM6 363 aa12.71□□□□□ -0.38
CLK4-201ENST00000316308 C14orf166Q9Y224 244 aaKnown RBP12.71□□□□□ -0.38
CLK4-201ENST00000316308 IFNA2P01563 188 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 OR5AC1P0C628 307 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 RBM11P57052 281 aaKnown RBP12.7□□□□□ -0.38
CLK4-201ENST00000316308 PCBD1P61457 104 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 PRDX4Q13162 271 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 EIF3IQ13347 325 aaKnown RBP12.7□□□□□ -0.38
CLK4-201ENST00000316308 FAM189A2Q15884 450 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 IAH1Q2TAA2 248 aaPredicted RBP12.7□□□□□ -0.38
CLK4-201ENST00000316308 NSUN5P2Q63ZY6 315 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 BPIFCQ8NFQ6 507 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 OR5L1Q8NGL2 311 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 SPSB4Q96A44 273 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 PLA2G2EQ9NZK7 142 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 B8ZZF3 427 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 SYNGR1O43759 233 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 HOXA4Q00056 320 aaPredicted RBP12.7□□□□□ -0.38
CLK4-201ENST00000316308 GGNBP1Q5YKI7 109 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 PRSS54Q6PEW0 395 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 LYZL2Q7Z4W2 148 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 HSD17B13Q7Z5P4 300 aaPredicted RBP12.7□□□□□ -0.38
CLK4-201ENST00000316308 C2orf50Q96LR7 162 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 REPIN1Q9BWE0 567 aaKnown RBP12.7□□□□□ -0.38
CLK4-201ENST00000316308 GPR87Q9BY21 358 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 SMIM3Q9BZL3 60 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 ZNF442Q9H7R0 627 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 MTCH1Q9NZJ7 389 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 SLC7A11Q9UPY5 501 aa12.7□□□□□ -0.38
CLK4-201ENST00000316308 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 RP1L1Q8IWN7 2480 aaPredicted RBP12.69□□□□□ -0.38
CLK4-201ENST00000316308 DMXL2Q8TDJ6 3036 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 CRYM-AS1A6NIL9 109 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 TSPAN4O14817 238 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 SCGB1D2O95969 90 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 SP1P08047 785 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 ID4P47928 161 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 TSC22D1Q15714 1073 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 RPL7L1Q6DKI1 246 aaKnown RBP12.69□□□□□ -0.38
CLK4-201ENST00000316308 LHFPL5Q8TAF8 219 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 ADAT1Q9BUB4 502 aaKnown RBP12.69□□□□□ -0.38
CLK4-201ENST00000316308 PRDM14Q9GZV8 571 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 TMEM231Q9H6L2 316 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 SPRR3Q9UBC9 169 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 HSF4Q9ULV5 492 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 BSNQ9UPA5 3926 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 GVINP1Q7Z2Y8 2422 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 SNAPC5O75971 98 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 DIRAS3O95661 229 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 ACTL6AO96019 429 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 WNT5AP41221 380 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 SMUG1Q53HV7 270 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 ZNF585AQ6P3V2 769 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 C17orf78Q8N4C9 275 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 B4GALT7Q9UBV7 327 aa12.69□□□□□ -0.38
CLK4-201ENST00000316308 ZNF292O60281 2723 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 RRP8O43159 456 aaKnown RBP12.68□□□□□ -0.38
CLK4-201ENST00000316308 IL18BPO95998 194 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 PLEKHN1Q494U1 663 aaPredicted RBP12.68□□□□□ -0.38
CLK4-201ENST00000316308 DHRS11Q6UWP2 260 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 ZNF100Q8IYN0 542 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 MDS2Q8NDY4 140 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 APH1AQ96BI3 265 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 NARS2Q96I59 477 aaKnown RBP12.68□□□□□ -0.38
CLK4-201ENST00000316308 PARP12Q9H0J9 701 aaKnown RBP12.68□□□□□ -0.38
CLK4-201ENST00000316308 BCO1Q9HAY6 547 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 DECR2Q9NUI1 292 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 LSM5Q9Y4Y9 91 aaKnown RBP12.68□□□□□ -0.38
CLK4-201ENST00000316308 DIDO1Q9BTC0 2240 aaKnown RBP12.68□□□□□ -0.38
CLK4-201ENST00000316308 ZFHX2Q9C0A1 2572 aaPredicted RBP12.68□□□□□ -0.38
CLK4-201ENST00000316308 C21orf140B9A014 251 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 XRCC2O43543 280 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 SYNGR4O95473 234 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 CTSDP07339 412 aaPredicted RBP12.68□□□□□ -0.38
CLK4-201ENST00000316308 CELA3BP08861 270 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 FAM157CP0CG43 387 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 ZNF728P0DKX0 622 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 SELEP16581 610 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 AADACP22760 399 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 BAP18Q8IXM2 172 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 RTN4IP1Q8WWV3 396 aaPredicted RBP12.68□□□□□ -0.38
CLK4-201ENST00000316308 SLC5A7Q9GZV3 580 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 NECAP2Q9NVZ3 263 aa12.68□□□□□ -0.38
CLK4-201ENST00000316308 PQLC2LA1A4F0 135 aa12.67□□□□□ -0.38
CLK4-201ENST00000316308 ZNF732B4DXR9 585 aa12.67□□□□□ -0.38
CLK4-201ENST00000316308 PDCD6O75340 191 aa12.67□□□□□ -0.38
CLK4-201ENST00000316308 CA11O75493 328 aa12.67□□□□□ -0.38
CLK4-201ENST00000316308 HKR1P10072 659 aa12.67□□□□□ -0.38
CLK4-201ENST00000316308 C20orf204Q6ZNR8 217 aa12.67□□□□□ -0.38
CLK4-201ENST00000316308 SGPP2Q8IWX5 399 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms