RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TCTN3Q6NUS6 607 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 GFRALQ6UXV0 394 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 MOGAT1Q96PD6 335 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 DEFB127Q9H1M4 99 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 C11orf94C9JXX5 98 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 OR4C3Q8NH37 302 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 MRGPRX3Q96LB0 322 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 TMPRSS11DO60235 418 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 ID1P41134 155 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 LINC00303Q3SY05 128 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 CARFQ8N187 725 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 CDC42EP3Q9UKI2 254 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 SLC22A13Q9Y226 551 aa13.85□□□□□ -0.19
HCFC1-201ENST00000310441 UBE2L3P68036 154 aaKnown RBP13.84□□□□□ -0.19
HCFC1-201ENST00000310441 LIAT1Q6ZQX7 453 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 TGIF2LXQ8IUE1 241 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 EIF3IQ13347 325 aaKnown RBP13.84□□□□□ -0.19
HCFC1-201ENST00000310441 DEFB108BQ8NET1 73 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 OR10G4Q8NGN3 311 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 OR10G9Q8NGN4 311 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 OR10G7Q8NGN6 311 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 OR1N2Q8NGR9 330 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 DERL3Q96Q80 235 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 NRSN2Q9GZP1 204 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 AUNIPQ9H7T9 357 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 CXorf1O96002 111 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 JAG1P78504 1218 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 CA13Q8N1Q1 262 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 OR10G8Q8NGN5 311 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 QSER1Q2KHR3 1735 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 ETV3LQ6ZN32 361 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 CCDC190Q86UF4 302 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 OR2C3Q8N628 320 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 ISG20L2Q9H9L3 353 aaKnown RBP13.84□□□□□ -0.19
HCFC1-201ENST00000310441 MARCH5Q9NX47 278 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 CACNG5Q9UF02 275 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 ATRXP46100 2492 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 TMEM265A0A087WTH1 108 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 OOEPA6NGQ2 149 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 PI3P19957 117 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 KLF3P57682 345 aaPredicted RBP13.84□□□□□ -0.19
HCFC1-201ENST00000310441 ZNF552Q9H707 407 aaPredicted RBP13.84□□□□□ -0.19
HCFC1-201ENST00000310441 IL20Q9NYY1 176 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 CES1P1Q9UKY3 287 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 SCN7AQ01118 1682 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 C9orf170A2RU37 121 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 KCNAB1Q14722 419 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 HIST3H3Q16695 136 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 ZNF707Q96C28 371 aaPredicted RBP13.84□□□□□ -0.19
HCFC1-201ENST00000310441 SPACA5Q96QH8 159 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 MTFP1Q9UDX5 166 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 LOXL2Q9Y4K0 774 aa13.84□□□□□ -0.19
HCFC1-201ENST00000310441 TRAV17A0A0B4J275 112 aa13.83□□□□□ -0.19
HCFC1-201ENST00000310441 B3GALT4O96024 378 aa13.83□□□□□ -0.19
HCFC1-201ENST00000310441 BSGP35613 385 aa13.83□□□□□ -0.19
HCFC1-201ENST00000310441 D2HGDHQ8N465 521 aa13.83□□□□□ -0.19
HCFC1-201ENST00000310441 TRMT61AQ96FX7 289 aaKnown RBP13.83□□□□□ -0.19
HCFC1-201ENST00000310441 FGF17O60258 216 aa13.83□□□□□ -0.19
HCFC1-201ENST00000310441 MPC2O95563 127 aa13.83□□□□□ -0.19
HCFC1-201ENST00000310441 TTRP02766 147 aa13.83□□□□□ -0.19
HCFC1-201ENST00000310441 CEBPDP49716 269 aaPredicted RBP13.83□□□□□ -0.19
HCFC1-201ENST00000310441 PACRGQ96M98 296 aaPredicted RBP13.83□□□□□ -0.19
HCFC1-201ENST00000310441 RASL11BQ9BPW5 248 aa13.83□□□□□ -0.19
HCFC1-201ENST00000310441 OR2D2Q9H210 308 aa13.83□□□□□ -0.19
HCFC1-201ENST00000310441 KLK8O60259 260 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 NGFP01138 241 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 TRA2AQ13595 282 aaKnown RBP eCLIP13.83□□□□□ -0.2
HCFC1-201ENST00000310441 BATF2Q8N1L9 274 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 HEATR5AQ86XA9 2040 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 H3BP45 60 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 FAAP20Q6NZ36 180 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 LYG1Q8N1E2 194 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 DUSP18Q8NEJ0 188 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 C20orf141Q9NUB4 165 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 KLK11Q9UBX7 282 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 GBF1Q92538 1859 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 ARFGEF3Q5TH69 2177 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 FAM3BP58499 235 aaPredicted RBP13.83□□□□□ -0.2
HCFC1-201ENST00000310441 ERVS71-1P61550 626 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 TBC1D26Q86UD7 250 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 ACAA2P42765 397 aaKnown RBP13.83□□□□□ -0.2
HCFC1-201ENST00000310441 P2RY1P47900 373 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 B2MP61769 119 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 UBE2FQ969M7 185 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 PITPNC1Q9UKF7 332 aa13.83□□□□□ -0.2
HCFC1-201ENST00000310441 METAP1P53582 386 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 FOXO1Q12778 655 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 C1orf174Q8IYL3 243 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 OR2I1PQ8NGU4 316 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 OR2J1Q9GZK6 312 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 GREB1Q4ZG55 1949 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 DHHO43323 396 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 DNPH1O43598 174 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 STPG2Q8N412 459 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 SNRNP40Q96DI7 357 aaKnown RBP13.82□□□□□ -0.2
HCFC1-201ENST00000310441 MMP17Q9ULZ9 603 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 SMPD2O60906 423 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 COL8A1P27658 744 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 HLA-DRB3P79483 266 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 ZNF750Q32MQ0 723 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms