RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SBK3P0C264 359 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 CCL4P13236 92 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 LGALS4P56470 323 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 SPNS2Q8IVW8 549 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 ZNF683Q8IZ20 524 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 OR10A7Q8NGE5 316 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 S1PR3Q99500 378 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 DEFB127Q9H1M4 99 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 POLDIP2Q9Y2S7 368 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 TIMM10BQ9Y5J6 103 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 A6NDN8 102 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 SEMA7AO75326 666 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 HRASP01112 189 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 KRASP01116 189 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 INHBBP09529 407 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 SLC26A10Q8NG04 563 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 OR10X1Q8NGY0 326 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 ACY3Q96HD9 319 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 FUT9Q9Y231 359 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 ZNF121P58317 390 aaPredicted RBP7.29□□□□□ -1.24
VPS41-202ENST00000310301 SLC38A11Q08AI6 406 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 PNRC1Q12796 327 aaPredicted RBP7.29□□□□□ -1.24
VPS41-202ENST00000310301 COL5A1-AS1Q5SY13 56 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 OR11H7Q8NGC8 314 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 OR1L3Q8NH93 324 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 TMPRSS13Q9BYE2 586 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 WDR54Q9H977 334 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 BCL2L10Q9HD36 194 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 NTMQ9P121 344 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 HELTA6NFD8 242 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 LRRC30A6NM36 301 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 KLK8O60259 260 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 ANKRD34CP0C6C1 535 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 FAM87AP0C7U9 286 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 SMIM17P0DL12 118 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 ZBTB25P24278 435 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 SLC6A12P48065 614 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 BSXQ3C1V8 233 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 OR4A47Q6IF82 309 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 VN1R17PQ8TDU5 208 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 SLC25A22Q9H936 323 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 TMEM74BQ9NUR3 256 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 OCIAD1Q9NX40 245 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 AMDHD2Q9Y303 409 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 WASHC3Q9Y3C0 194 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 TMED3Q9Y3Q3 217 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 PCDHGA9Q9Y5G4 932 aaKnown RBP7.28□□□□□ -1.24
VPS41-202ENST00000310301 ANKRD20A5PA0PJZ0 165 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 GFYI3L273 518 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 SIAH2O43255 324 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 ZNF253O75346 499 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 HOXD4P09016 255 aaPredicted RBP7.28□□□□□ -1.24
VPS41-202ENST00000310301 SELEP16581 610 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 CAMPP49913 170 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 B3GNTL1Q67FW5 361 aaPredicted RBP7.28□□□□□ -1.24
VPS41-202ENST00000310301 BCL2L2Q92843 193 aaPredicted RBP7.28□□□□□ -1.24
VPS41-202ENST00000310301 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 MRPS24Q96EL2 167 aaKnown RBP7.28□□□□□ -1.24
VPS41-202ENST00000310301 RHOVQ96L33 236 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 SLC17A5Q9NRA2 495 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 DAPP1Q9UN19 280 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 CD99P14209 185 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 HAAOP46952 286 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 TMEM33P57088 247 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 TMPRSS11FQ6ZWK6 438 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 SLC25A26Q70HW3 274 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 TMEM251Q8N6I4 163 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 OR1L6Q8NGR2 347 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 TTC9Q92623 222 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 RAB33BQ9H082 229 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 RASL12Q9NYN1 266 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 A0A1W2PR77 199 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 C5orf49A4QMS7 147 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 LSRQ86X29 649 aaPredicted RBP7.28□□□□□ -1.24
VPS41-202ENST00000310301 CALHM3Q86XJ0 350 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 C8orf44Q96CB5 159 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 ATG101Q9BSB4 218 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 MAP1LC3CQ9BXW4 147 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 LAT2Q9GZY6 243 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 TXNIPQ9H3M7 391 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 MED29Q9NX70 200 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 ANKRD10Q9NXR5 420 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 PITPNC1Q9UKF7 332 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 V9GYH0 126 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 IGHV5-51A0A0C4DH38 117 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 NCBP2LA6PVI3 153 aaKnown RBP7.28□□□□□ -1.24
VPS41-202ENST00000310301 PLPP2O43688 288 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 GDF9O60383 454 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 CTAG2O75638 210 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 PGA3P0DJD8 388 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 CDC34P49427 236 aaPredicted RBP7.28□□□□□ -1.24
VPS41-202ENST00000310301 IL13RA2Q14627 380 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 PWWP2BQ6NUJ5 590 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 TMEM65Q6PI78 240 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 TP53RKQ96S44 253 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 HSF4Q9ULV5 492 aa7.28□□□□□ -1.24
VPS41-202ENST00000310301 TRGV5A0A0B4J1U4 118 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 IGHV3-20A0A0C4DH32 117 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 A0A1W2PNR3 127 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 SLC25A5P05141 298 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms