RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 NPIPA3F8WFD2 350 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 G3V3Y1 287 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 H7C2Y5 167 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SULT2B1O00204 365 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 PLPP3O14495 311 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TAAR5O14804 337 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TSPAN2O60636 221 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SLC16A7O60669 478 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 CA11O75493 328 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ATG12O94817 140 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SPDEFO95238 335 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 AHSA1O95433 338 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 PNPP00491 289 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 APOC3P02656 99 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 HEXAP06865 529 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 CD79AP11912 226 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TPT1P13693 172 aaKnown RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF823P16415 610 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 MAOAP21397 527 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 PSMB6P28072 239 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 BDKRB2P30411 391 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 CYB561P49447 251 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 DAP3P51398 398 aaKnown RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 CCR4P51679 360 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 PRKXP51817 358 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SUMO3P55854 103 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 PPIAP62937 165 aaKnown RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 EIF2B1Q14232 305 aaKnown RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ARL6IP1Q15041 203 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ETFDHQ16134 617 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 MICBQ29980 383 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 GXYLT1Q4G148 440 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 VAX1Q5SQQ9 334 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 GLYATL3Q5SZD4 288 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 C1orf140Q5VVS0 124 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ELP2Q6IA86 826 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ASPHD2Q6ICH7 369 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 C3orf33Q6P1S2 294 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF529Q6P280 563 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 CBLN3Q6UW01 205 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 IL34Q6ZMJ4 242 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 CFAP77Q6ZQR2 320 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SEM1Q6ZVN7 128 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 GRINAQ7Z429 371 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM200AQ86VY9 491 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 LINC00518Q8N0U6 118 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SVBPQ8N300 66 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SLC22A24Q8N4F4 322 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ARRDC1Q8N5I2 433 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 Q8N9P0 234 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ADPRHL1Q8NDY3 354 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 WFDC11Q8NEX6 87 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SLC26A10Q8NG04 563 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 OR51A4Q8NGJ6 313 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 OR13C8Q8NGS7 320 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 MFSD8Q8NHS3 518 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 GPR119Q8TDV5 335 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 PPP1R1CQ8WVI7 109 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM234Q8WY98 164 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ST8SIA1Q92185 356 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 RND1Q92730 232 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 DAZLQ92904 295 aaKnown RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ARL11Q969Q4 196 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SAT2Q96F10 170 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 LRRC46Q96FV0 321 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 CLUHP3Q96NS8 147 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 AMELYQ99218 206 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 NPAS1Q99742 590 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SLC6A7Q99884 636 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 VRK1Q99986 396 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 PDCD10Q9BUL8 212 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 PTDSS2Q9BVG9 487 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 NKX6-2Q9C056 277 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TINAGL1Q9GZM7 467 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM185BQ9H7F4 350 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 MOB1AQ9H8S9 216 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 ZDHHC11Q9H8X9 412 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 KCNJ16Q9NPI9 418 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 G6PC2Q9NQR9 355 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 COQ3Q9NZJ6 369 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 MBD2Q9UBB5 411 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 DNAJB11Q9UBS4 358 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 C19orf25Q9UFG5 118 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 OR52A1Q9UKL2 312 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 SLC22A13Q9Y226 551 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TMED7Q9Y3B3 224 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 NOP16Q9Y3C1 178 aaKnown RBP4.23□□□□□ -1.73
CKS1B-201ENST00000308987 RHBDD3Q9Y3P4 386 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 LRP12Q9Y561 859 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 POMT1Q9Y6A1 747 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 PLCE1Q9P212 2302 aa4.23□□□□□ -1.73
CKS1B-201ENST00000308987 TRBV11-1A0A0K0K1C0 115 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 PQLC2LA1A4F0 135 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 FAM166BA8MTA8 275 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM14DPA8MWL7 114 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 FTCDNL1E5RQL4 147 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 F5H0A9 414 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 H7C1C5 153 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms