RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.9□□□□□ -1.46
PTCD2-201ENST00000308077 CA10Q9NS85 328 aa5.9□□□□□ -1.46
PTCD2-201ENST00000308077 ST3GAL6Q9Y274 331 aa5.9□□□□□ -1.46
PTCD2-201ENST00000308077 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.9□□□□□ -1.47
PTCD2-201ENST00000308077 TMEM210A6NLX4 147 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 TRAPPC2LH3BP13 241 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 CDIPTO14735 213 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 AKR7A2O43488 359 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 RBBP9O75884 186 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 GRPP07492 148 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 GSTP1P09211 210 aaKnown RBP5.9□□□□□ -1.47
PTCD2-201ENST00000308077 CHATP28329 748 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 FGF12P61328 243 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 HOXA4Q00056 320 aaPredicted RBP5.9□□□□□ -1.47
PTCD2-201ENST00000308077 MPPED2Q15777 294 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 ADIPOQQ15848 244 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 FAM189A2Q15884 450 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 ZNF826PQ6ZT77 177 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 TRAPPC6BQ86SZ2 158 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 GVQW1Q8N7I0 195 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 NEUROG1Q92886 237 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 MRPS24Q96EL2 167 aaKnown RBP5.9□□□□□ -1.47
PTCD2-201ENST00000308077 TLNRD1Q9H1K6 362 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 ZNF442Q9H7R0 627 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 NGBQ9NPG2 151 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 TAAR3PQ9P1P4 343 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 NLKQ9UBE8 527 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 NDRG3Q9UGV2 375 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 POU2F3Q9UKI9 436 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 ATP23Q9Y6H3 246 aa5.9□□□□□ -1.47
PTCD2-201ENST00000308077 BIRC6Q9NR09 4857 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 ECDO95905 644 aaPredicted RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 CYB5AP00167 134 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 PLAUP00749 431 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 PGA5P0DJD9 388 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 PRKACAP17612 351 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 LOXP28300 417 aaPredicted RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 SLC6A1P30531 599 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 ERVK11-1P61568 191 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 SSBP1Q04837 148 aaKnown RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 PNLIPRP3Q17RR3 467 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 PLA1AQ53H76 456 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 NHLRC3Q5JS37 347 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 NKAPLQ5M9Q1 402 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 SFRP4Q6FHJ7 346 aaPredicted RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 MZT2BQ6NZ67 158 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 BRICD5Q6PL45 260 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 DUSP18Q8NEJ0 188 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 OR2Z1Q8NG97 314 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 OR4D10Q8NGI6 311 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 ENKURQ8TC29 256 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 DYRK2Q92630 601 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 SULT4A1Q9BR01 284 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 C7orf50Q9BRJ6 194 aaKnown RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 ESRP2Q9H6T0 727 aaKnown RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 PCDHB16Q9NRJ7 776 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 HSF4Q9ULV5 492 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 ANAPC10Q9UM13 185 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 FLNAP21333 2647 aaKnown RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 FAM240BA0A1B0GVZ2 78 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 E7EQL1 145 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 CLDN14O95500 239 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 PTBP3O95758 552 aaKnown RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 CD3DP04234 171 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 CSF1P09603 554 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 OR4A8P0C604 315 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 GSTT2BP0CG30 244 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 GIFP27352 417 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 DUSP1P28562 367 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 CD200P41217 278 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 CCR6P51684 374 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 GNG2P59768 71 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 AP3S2P59780 193 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 ACTBP60709 375 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 ACTG1P63261 375 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 WDR82Q6UXN9 313 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 ZNF554Q86TJ5 538 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 FAM58AQ8N1B3 248 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 SPERTQ8NA61 448 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 OR4S1Q8NGB4 309 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 OR4C16Q8NGL9 310 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 SNAPC3Q92966 411 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 EMG1Q92979 244 aaKnown RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 UPRTQ96BW1 309 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 ELMOD3Q96FG2 381 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 LRRC46Q96FV0 321 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 NRIP2Q9BQI9 281 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 HDHD3Q9BSH5 251 aaPredicted RBP5.89□□□□□ -1.47
PTCD2-201ENST00000308077 FAAP24Q9BTP7 215 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 UFSP2Q9NUQ7 469 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 PLEKHJ1Q9NW61 149 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 NKIRAS2Q9NYR9 191 aa5.89□□□□□ -1.47
PTCD2-201ENST00000308077 PLCE1Q9P212 2302 aa5.88□□□□□ -1.47
PTCD2-201ENST00000308077 PLSCR5A0PG75 271 aa5.88□□□□□ -1.47
PTCD2-201ENST00000308077 FAM90A10PA6NDY2 464 aa5.88□□□□□ -1.47
PTCD2-201ENST00000308077 FAM90A18PA6NE21 464 aa5.88□□□□□ -1.47
PTCD2-201ENST00000308077 FAM90A16PA6NEW6 464 aa5.88□□□□□ -1.47
PTCD2-201ENST00000308077 TUBAL3A6NHL2 446 aa5.88□□□□□ -1.47
PTCD2-201ENST00000308077 FAM90A20PA6NIJ5 464 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms