RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PLSCR4Q9NRQ2 329 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 ARPC5O15511 151 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 NOS1APO75052 506 aaPredicted RBP5.6□□□□□ -1.51
USP47-201ENST00000305481 AGFG2O95081 481 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 CGAP01215 116 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 PRKACAP17612 351 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 FUT3P21217 361 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 DTYMKP23919 212 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 FGF12P61328 243 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 OPCMLQ14982 345 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 ALKBH6Q3KRA9 238 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 NSUN5P2Q63ZY6 315 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 ZNF585AQ6P3V2 769 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 CLEC18BQ6UXF7 455 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 OR6K3Q8NGY3 331 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 ASB13Q8WXK3 278 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 STARD4Q96DR4 205 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 ZNF488Q96MN9 340 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 PHB2Q99623 299 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 OR2J1Q9GZK6 312 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 C12orf4Q9NQ89 552 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 DECR2Q9NUI1 292 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 EDARQ9UNE0 448 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 APC2O95996 2303 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 FXYD6-FXYD2A0A087WZ82 144 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 ANKRD30BLA7E2S9 258 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 OR7C1O76099 320 aaPredicted RBP5.6□□□□□ -1.51
USP47-201ENST00000305481 TAS2R31P59538 309 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 UBE2NP61088 152 aaKnown RBP5.6□□□□□ -1.51
USP47-201ENST00000305481 B2MP61769 119 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 GTF3C1Q12789 2109 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 PLEKHN1Q494U1 663 aaPredicted RBP5.6□□□□□ -1.51
USP47-201ENST00000305481 DHRS11Q6UWP2 260 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 FBXW12Q6X9E4 464 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 KCTD9Q7L273 389 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 C5orf24Q7Z6I8 188 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 WDR86Q86TI4 376 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 TMEM17Q86X19 198 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 CCDC36Q8IYA8 594 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 ZNF610Q8N9Z0 462 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 OR5L1Q8NGL2 311 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 ZNF2Q9BSG1 426 aaPredicted RBP5.6□□□□□ -1.51
USP47-201ENST00000305481 FXYD6Q9H0Q3 95 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 LUZP4Q9P127 313 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 LHX6Q9UPM6 363 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 MPC1Q9Y5U8 109 aa5.6□□□□□ -1.51
USP47-201ENST00000305481 INTS1Q8N201 2190 aaKnown RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 ZSCAN5BA6NJL1 495 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 RFPL4AA6NLU0 287 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 PRSS47A8MTI9 375 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 RFPL4AL1F8VTS6 287 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 SFT2D2O95562 160 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 IGKV3-15P01624 115 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 OR5H8P0DN80 308 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 PPP1CBP62140 327 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 ANKRD55Q3KP44 614 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 NHLRC3Q5JS37 347 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 LPCAT3Q6P1A2 487 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 INO80CQ6PI98 192 aaPredicted RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 HAGHLQ6PII5 290 aaPredicted RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 RPRMLQ8N4K4 120 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 OPN3Q9H1Y3 402 aaPredicted RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 OR51I2Q9H344 312 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 PCDHB16Q9NRJ7 776 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 SSUH2Q9Y2M2 353 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 ESPL1Q14674 2120 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 MBD3L4A6NDZ8 208 aaPredicted RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 MBD3L3A6NE82 208 aaPredicted RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 MBD3L5A6NJ08 208 aaPredicted RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 MPTX1A8MV57 137 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 L7N2F9 121 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 M0R233 179 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 RHBDL1O75783 438 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 DUSP1P28562 367 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 PMELP40967 661 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 UCP2P55851 309 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 EXOSC2Q13868 293 aaKnown RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 SLC9A3R2Q15599 337 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 OR2A2Q6IF42 318 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 TMUB2Q71RG4 321 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 CXorf67Q86X51 503 aaPredicted RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 MBD3L2Q8NHZ7 208 aaPredicted RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 PPP1R1CQ8WVI7 109 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 POM121Q96HA1 1249 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 ZNF71Q9NQZ8 489 aaPredicted RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 RCC2Q9P258 522 aaKnown RBP5.59□□□□□ -1.51
USP47-201ENST00000305481 FAM215AQ9Y5M1 114 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 SHANK1Q9Y566 2161 aa5.59□□□□□ -1.51
USP47-201ENST00000305481 FAM90A10PA6NDY2 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A18PA6NE21 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A16PA6NEW6 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A20PA6NIJ5 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A8PA6NJQ4 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A7PA6NKC0 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A22PA8MWA6 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A12PA8MX19 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A5PA8MXJ8 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A23PA8MXZ1 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 J3QW42 95 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A15PP0C7V4 464 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms