RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FAHD2AQ96GK7 314 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 OR3A1P47881 315 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 FGF8P55075 233 aaPredicted RBP12.33□□□□□ -0.44
PRKCB-201ENST00000303531 TSPO2Q5TGU0 170 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 CLEC18BQ6UXF7 455 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 RASL10BQ96S79 203 aa12.33□□□□□ -0.44
PRKCB-201ENST00000303531 CTSDP07339 412 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-201ENST00000303531 INPP5JQ15735 1006 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-201ENST00000303531 BCL2L2Q92843 193 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-201ENST00000303531 ZNF785A8K8V0 405 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 CYR61O00622 381 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 SPINK4O60575 86 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 OR2J3O76001 311 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 RAB7AP51149 207 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 RAC3P60763 192 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 POLR2GP62487 172 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRKCB-201ENST00000303531 SPINK14Q6IE38 97 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 YTHDF2Q9Y5A9 579 aaKnown RBP12.32□□□□□ -0.44
PRKCB-201ENST00000303531 EML2O95834 649 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 SLC25A30Q5SVS4 291 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 ETV3LQ6ZN32 361 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 NOL4LQ96MY1 436 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-201ENST00000303531 AAMDCQ9H7C9 122 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 ANXA10Q9UJ72 324 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 OR5B21A6NL26 309 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 SPINK2P20155 84 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 BMP5P22003 454 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 PTTG1IPP53801 180 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.444e-8■■■■■ 27.9
PRKCB-201ENST00000303531 IRF3Q14653 427 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 ZNF426Q9BUY5 554 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 FSCN3Q9NQT6 498 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 TRPM6Q9BX84 2022 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 OR2M5A3KFT3 312 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 RANP62826 216 aaKnown RBP12.32□□□□□ -0.44
PRKCB-201ENST00000303531 RPS4Y2Q8TD47 263 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 VAMP8Q9BV40 100 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 TOMM20LQ6UXN7 152 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 TBC1D26Q86UD7 250 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 TM4SF19Q96DZ7 209 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 NXF2Q9GZY0 626 aaKnown RBP12.32□□□□□ -0.44
PRKCB-201ENST00000303531 NAT8BQ9UHF3 227 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 MCM3APO60318 1980 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 DLEC1Q9Y238 1755 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 TOX3O15405 576 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-201ENST00000303531 IGHV3-13P01766 116 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 IGHV3-7P01780 117 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 GYPAP02724 150 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 CDC34P49427 236 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-201ENST00000303531 Q56UQ5 140 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 PARD6AQ9NPB6 346 aa12.32□□□□□ -0.44
PRKCB-201ENST00000303531 C3orf80F5H4A9 247 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 FOXC1Q12948 553 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 OR10G4Q8NGN3 311 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 OR10G9Q8NGN4 311 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 OR10G7Q8NGN6 311 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 GPR27Q9NS67 375 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 LRRC3CA6NJW4 275 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 SKP2Q13309 424 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 DHRS7BQ6IAN0 325 aaPredicted RBP12.31□□□□□ -0.44
PRKCB-201ENST00000303531 LIAT1Q6ZQX7 453 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 FA2HQ7L5A8 372 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 SLC45A2Q9UMX9 530 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 POMT1Q9Y6A1 747 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 SLC25A5P05141 298 aaKnown RBP12.31□□□□□ -0.44
PRKCB-201ENST00000303531 GNG4P50150 75 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 HIST1H3AP68431 136 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 SPEM2Q0P670 501 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 BTNL3Q6UXE8 466 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 NUFIP2Q7Z417 695 aaKnown RBP12.31□□□□□ -0.44
PRKCB-201ENST00000303531 C11orf42Q8N5U0 333 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 RPEQ96AT9 228 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 STARD10Q9Y365 291 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 A0A1W2PNV4 684 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 NPIPB8E9PQR5 432 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 LY86O95711 162 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 NEIL1Q96FI4 390 aaPredicted RBP12.31□□□□□ -0.44
PRKCB-201ENST00000303531 DYNLT3P51808 116 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 CCL17Q92583 94 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 LHX9Q9NQ69 397 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 KIAA1217Q5T5P2 1943 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 TNFAIP6P98066 277 aaPredicted RBP12.31□□□□□ -0.44
PRKCB-201ENST00000303531 NHLRC2Q8NBF2 726 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 OR11H7Q8NGC8 314 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 MPC1Q9Y5U8 109 aa12.31□□□□□ -0.44
PRKCB-201ENST00000303531 OR4C45A6NMZ5 311 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 CHRNA7P36544 502 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 GZMMP51124 257 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 SCMH1Q96GD3 660 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 LINC00052Q96N35 136 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 VPS25Q9BRG1 176 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 KIR2DS2P43631 304 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 KLF3P57682 345 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-201ENST00000303531 LSM6P62312 80 aaKnown RBP12.3□□□□□ -0.44
PRKCB-201ENST00000303531 TMEM147Q9BVK8 224 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 SMOC1Q9H4F8 434 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 SLC52A3Q9NQ40 469 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 IL36GQ9NZH8 169 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 USP54Q70EL1 1684 aa12.3□□□□□ -0.44
PRKCB-201ENST00000303531 TMEM265A0A087WTH1 108 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms