RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CHST6Q9GZX3 395 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 GHITMQ9H3K2 345 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 ZNF442Q9H7R0 627 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 MSL2Q9HCI7 577 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 A0A1B0GUH1 482 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 A0A1B0GWJ7 208 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 PLSCR5A0PG75 271 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 CDIPTO14735 213 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 PMP2P02689 132 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 RLN1P04808 185 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 DTYMKP23919 212 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 OR3A3P47888 321 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 EIF2B2P49770 351 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 CBX3Q13185 183 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 IKZF1Q13422 519 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 IL13RA2Q14627 380 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 VAX1Q5SQQ9 334 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 VHLLQ6RSH7 139 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 Q6ZR03 302 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 PIAS4Q8N2W9 510 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 NUP37Q8NFH4 326 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 TMEM171Q8WVE6 324 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 OR51J1Q9H342 316 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 ZNF581Q9P0T4 197 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 SHANK1Q9Y566 2161 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 PYCARD-AS1I3L0S3 204 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 ACAA1P09110 424 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 PDCD1Q15116 288 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 MICBQ29980 383 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 CHRFAM7AQ494W8 412 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 ARRDC1Q8N5I2 433 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 OR6F1Q8NGZ6 308 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 LRRC46Q96FV0 321 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 MED30Q96HR3 178 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 ZNF488Q96MN9 340 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 BEX2Q9BXY8 128 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 MED28Q9H204 178 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 BEX1Q9HBH7 125 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 GPN1Q9HCN4 374 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 ZNF230Q9UIE0 474 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 ZNF221Q9UK13 617 aa13.36□□□□□ -0.27
HERPUD1-201ENST00000300302 PRR14LQ5THK1 2151 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 IGLV3-9A0A075B6K5 115 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 UBE2QL1A1L167 161 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 F5H5P2 479 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 THBDP07204 575 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 PGA5P0DJD9 388 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 IGFBP7Q16270 282 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 FBXL19-AS1Q494R0 122 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 BRICD5Q6PL45 260 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 TMEM17Q86X19 198 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 OR5AP2Q8NGF4 316 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 CYYR1Q96J86 154 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 C12orf4Q9NQ89 552 aa13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 RCC2Q9P258 522 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-201ENST00000300302 SPTA1P02549 2419 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 MCRIP1C9JLW8 97 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 ABCD4O14678 606 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 NXPH2O95156 264 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 IL5P05113 134 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 ANXA7P20073 488 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 ERVK11-1P61568 191 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 TSPAN5P62079 268 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 ESPL1Q14674 2120 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 DAZAP2Q15038 168 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 SLC22A25Q6T423 547 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 FIP1L1Q6UN15 594 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 GLDNQ6ZMI3 551 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 LRP11Q86VZ4 500 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 OR2Z1Q8NG97 314 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 CCDC107Q8WV48 283 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 WFIKKN1Q96NZ8 548 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 NRIP2Q9BQI9 281 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 HDHD3Q9BSH5 251 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 TLNRD1Q9H1K6 362 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 NBEAQ8NFP9 2946 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 ITPR1Q14643 2758 aa13.34□□□□□ -0.27
HERPUD1-201ENST00000300302 TMEM82A0PJX8 343 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 A6NLC8 198 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 NOS1APO75052 506 aaPredicted RBP13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 GLAP06280 429 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 FCGR3AP08637 254 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 ARPC4P59998 168 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 MAB21L1Q13394 359 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 MSMPQ1L6U9 139 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 CD276Q5ZPR3 534 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 POC1AQ8NBT0 407 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 MAFIPQ8WZ33 124 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 RNASE6Q93091 150 aaKnown RBP13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 SYT3Q9BQG1 590 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 IFT22Q9H7X7 185 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 ING3Q9NXR8 418 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 IL36RNQ9UBH0 155 aa13.33□□□□□ -0.27
HERPUD1-201ENST00000300302 DPRXA6NFQ7 191 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 FAM90A27PA6NNH2 459 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 SSNA1O43805 119 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 DUSP1P28562 367 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 CD200P41217 278 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 BSPH1Q075Z2 132 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms