RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 FABP1P07148 127 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 GLI4P10075 376 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 HRH1P35367 487 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 ZNF674Q2M3X9 581 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 NKAPLQ5M9Q1 402 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 SLC25A24Q6NUK1 477 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 C6orf201Q7Z4U5 140 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 SAXO1Q8IYX7 474 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 FBXL14Q8N1E6 418 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 ASCC1Q8N9N2 400 aaKnown RBP12.22□□□□□ -0.45
C9orf3-202ENST00000297979 OR1J1Q8NGS3 322 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 PRRT1Q99946 306 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 SLC25A21Q9BQT8 299 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-202ENST00000297979 GON7Q9BXV9 100 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 SLC2A8Q9NY64 477 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 BOD1L1Q8NFC6 3051 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 IGLV1-44P01699 117 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 HPXP02790 462 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 RLN1P04808 185 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 IL5P05113 134 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 CSN2P05814 226 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 MPZP25189 248 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 ERVS71-1P61550 626 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 NKPD1Q17RQ9 610 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 PIGYQ3MUY2 71 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 ZNF474Q6S9Z5 364 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-202ENST00000297979 SLC25A40Q8TBP6 338 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 GPN1Q9HCN4 374 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-202ENST00000297979 HSF4Q9ULV5 492 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 DMXL2Q8TDJ6 3036 aa12.22□□□□□ -0.45
C9orf3-202ENST00000297979 OR5B21A6NL26 309 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 SSNA1O43805 119 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 CECR9P0C854 216 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 ZNF35P13682 527 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 SPCS3P61009 180 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 MAB21L1Q13394 359 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 SCGB2B2Q4G0G5 96 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 ACTBL2Q562R1 376 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 GFRALQ6UXV0 394 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 OR4K15Q8NH41 348 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 ST3GAL6Q9Y274 331 aa12.21□□□□□ -0.45
C9orf3-202ENST00000297979 GEMIN2O14893 280 aaKnown RBP12.21□□□□□ -0.46
C9orf3-202ENST00000297979 RBM11P57052 281 aaKnown RBP12.21□□□□□ -0.46
C9orf3-202ENST00000297979 TUSC1Q2TAM9 212 aa12.21□□□□□ -0.46
C9orf3-202ENST00000297979 UNQ6126/PRO20091Q6UXV3 157 aa12.21□□□□□ -0.46
C9orf3-202ENST00000297979 TMEM200AQ86VY9 491 aa12.21□□□□□ -0.46
C9orf3-202ENST00000297979 DOLPP1Q86YN1 238 aa12.21□□□□□ -0.46
C9orf3-202ENST00000297979 FAM169BQ8N8A8 192 aa12.21□□□□□ -0.46
C9orf3-202ENST00000297979 OR11H7Q8NGC8 314 aa12.21□□□□□ -0.46
C9orf3-202ENST00000297979 SNRNP40Q96DI7 357 aaKnown RBP12.21□□□□□ -0.46
C9orf3-202ENST00000297979 SLC25A15Q9Y619 301 aa12.21□□□□□ -0.46
C9orf3-202ENST00000297979 CA6P23280 308 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 CHATP28329 748 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 GNG3P63215 75 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 HOGA1Q86XE5 327 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 MKXQ8IYA7 352 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 KDF1Q8NAX2 398 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-202ENST00000297979 EMG1Q92979 244 aaKnown RBP12.2□□□□□ -0.46
C9orf3-202ENST00000297979 SLAMF9Q96A28 289 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 CEP295Q9C0D2 2601 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 PMP2P02689 132 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 IFNA6P05013 189 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 SELEP16581 610 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 NPBWR2P48146 333 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 SLC36A1Q7Z2H8 476 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF573Q86YE8 665 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 OR13C8Q8NGS7 320 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 LRRC20Q8TCA0 184 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 TUBD1Q9UJT1 453 aa12.2□□□□□ -0.46
C9orf3-202ENST00000297979 IGHV1-18A0A0C4DH31 117 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 SNRPGP15A8MWD9 76 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 CREBL2O60519 120 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-202ENST00000297979 SULT1A3P0DMM9 295 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 SULT1A4P0DMN0 295 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 VSIG10L2P0DP72 767 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 AMY2BP19961 511 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 BCL3P20749 454 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 MICBQ29980 383 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 PRR30Q53SZ7 412 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-202ENST00000297979 TIMM23BQ5SRD1 257 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF626Q68DY1 528 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 ELP2Q6IA86 826 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 OR10AD1Q8NGE0 317 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 VRK1Q99986 396 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-202ENST00000297979 ST6GALNAC5Q9BVH7 336 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF581Q9P0T4 197 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 NOP16Q9Y3C1 178 aaKnown RBP12.19□□□□□ -0.46
C9orf3-202ENST00000297979 TMEM82A0PJX8 343 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 IQCF6A8MYZ5 107 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 MSTNO14793 375 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 OPRM1P35372 400 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 SNU13P55769 128 aaKnown RBP12.19□□□□□ -0.46
C9orf3-202ENST00000297979 VAX1Q5SQQ9 334 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 HAGHLQ6PII5 290 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-202ENST00000297979 S100PBPQ96BU1 408 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 ASF1BQ9NVP2 202 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF222Q9UK12 451 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 RNF24Q9Y225 148 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF835Q9Y2P0 537 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 PTPRQQ9UMZ3 2332 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms