RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 KLF9Q13886 244 aaPredicted RBP11.29□□□□□ -0.6
PTCD1-201ENST00000292478 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 OR2H1Q9GZK4 316 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 SLC35B3Q9H1N7 401 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 XIRP1Q702N8 1843 aaKnown RBP11.29□□□□□ -0.6
PTCD1-201ENST00000292478 ANKRD31Q8N7Z5 1873 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 B4E171 279 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 HRKO00198 91 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 RGS13O14921 159 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 TSPAN7P41732 249 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 HFEQ30201 348 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 DGAT2L6Q6ZPD8 337 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 CXorf67Q86X51 503 aaPredicted RBP11.29□□□□□ -0.6
PTCD1-201ENST00000292478 OR2T6Q8NHC8 308 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 LRRC3BQ96PB8 259 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 ST6GALNAC2Q9UJ37 374 aa11.29□□□□□ -0.6
PTCD1-201ENST00000292478 MPGP29372 298 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 BMI1P35226 326 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 PRRX1P54821 245 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 PDCD1Q15116 288 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 TMEM91Q6ZNR0 172 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 SLC26A10Q8NG04 563 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 TMEM147Q9BVK8 224 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 GPR35Q9HC97 309 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 PILRAQ9UKJ1 303 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 WSB1Q9Y6I7 421 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 OOEPA6NGQ2 149 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 TXNDC12O95881 172 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 RNF2Q99496 336 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 CACNG5Q9UF02 275 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 TRIP11Q15643 1979 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 M0R296 226 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 MLF1P58340 268 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 SPINK14Q6IE38 97 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 BHLHA15Q7RTS1 189 aaPredicted RBP11.28□□□□□ -0.6
PTCD1-201ENST00000292478 SSX8Q7RTT4 187 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 GVQW1Q8N7I0 195 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 ACY3Q96HD9 319 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 OR2D2Q9H210 308 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 ZDHHC11Q9H8X9 412 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 TMEM38BQ9NVV0 291 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 TMEM11P17152 192 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 ZFP36L2P47974 494 aaKnown RBP11.28□□□□□ -0.6
PTCD1-201ENST00000292478 TMEM267Q0VDI3 215 aaPredicted RBP11.28□□□□□ -0.6
PTCD1-201ENST00000292478 MOGAT2Q3SYC2 334 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 LIAT1Q6ZQX7 453 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 LYG1Q8N1E2 194 aa11.28□□□□□ -0.6
PTCD1-201ENST00000292478 A0A1W2PPQ1 181 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 M0QZ24 198 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 Q3ZCU0 254 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 C1orf174Q8IYL3 243 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 ZBTB34Q8NCN2 500 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 A0A1W2PN81 502 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 LYZL6O75951 148 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 CHRNA7P36544 502 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 INPP5JQ15735 1006 aaPredicted RBP11.27□□□□□ -0.6
PTCD1-201ENST00000292478 TMPRSS13Q9BYE2 586 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 CHST5Q9GZS9 411 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 FBXL17Q9UF56 701 aa11.27□□□□□ -0.6
PTCD1-201ENST00000292478 TMEM210A6NLX4 147 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 CLEC18BQ6UXF7 455 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 TMEM52Q8NDY8 209 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 OR10AD1Q8NGE0 317 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 OR5A2Q8NGI9 324 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 LURAP1Q96LR2 239 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 CDX2Q99626 313 aaPredicted RBP11.27□□□□□ -0.61
PTCD1-201ENST00000292478 PRSS27Q9BQR3 290 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 NRXN2Q9P2S2 1712 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 MAP1LC3B2A6NCE7 125 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 FAM24AA6NFZ4 105 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 DXOO77932 396 aaKnown RBP11.27□□□□□ -0.61
PTCD1-201ENST00000292478 IGF2P01344 180 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 CRHP06850 196 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 SELENOPP49908 381 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 RHOBP62745 196 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 RANP62826 216 aaKnown RBP11.27□□□□□ -0.61
PTCD1-201ENST00000292478 OR4S2Q8NH73 311 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 VSTM2AQ8TAG5 236 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 RPEQ96AT9 228 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 MOB3AQ96BX8 217 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 GPX7Q96SL4 187 aaPredicted RBP11.27□□□□□ -0.61
PTCD1-201ENST00000292478 MAP1LC3BQ9GZQ8 125 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 BARX1Q9HBU1 254 aaPredicted RBP11.27□□□□□ -0.61
PTCD1-201ENST00000292478 YTHDF2Q9Y5A9 579 aaKnown RBP11.27□□□□□ -0.61
PTCD1-201ENST00000292478 CLDN34H7C241 214 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 ASAH2BP0C7U1 165 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 OR3A1P47881 315 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 CSRP3P50461 194 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 TMEM241Q24JQ0 296 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 ZNF528Q3MIS6 628 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 VASH2Q86V25 355 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 WDR13Q9H1Z4 485 aa11.27□□□□□ -0.61
PTCD1-201ENST00000292478 PCDHGA9Q9Y5G4 932 aaKnown RBP11.27□□□□□ -0.61
PTCD1-201ENST00000292478 J3QT63 122 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 HYAL3O43820 417 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-201ENST00000292478 CCL4P13236 92 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 HNF1AP20823 631 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 TUSC5Q8IXB3 177 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 STPG2Q8N412 459 aa11.26□□□□□ -0.61
PTCD1-201ENST00000292478 OR1L4Q8NGR5 311 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms