RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 RPS24P62847 133 aaKnown RBP3.92□□□□□ -1.78
NCOA1-201ENST00000288599 RPS27AP62979 156 aaKnown RBP3.92□□□□□ -1.78
NCOA1-201ENST00000288599 UBA52P62987 128 aaKnown RBP3.92□□□□□ -1.78
NCOA1-201ENST00000288599 MRPS10P82664 201 aaKnown RBP3.92□□□□□ -1.78
NCOA1-201ENST00000288599 ZNF763Q0D2J5 394 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 C1orf220Q5T0J3 134 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 TMEM78Q5T7P6 136 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 TMEM88Q6PEY1 159 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 NPAS3Q8IXF0 933 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 VSTM2AQ8TAG5 236 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 OR2A7Q96R45 310 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 PRRT1Q99946 306 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 SLC46A2Q9BY10 475 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 PLSCR2Q9NRY7 297 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 SLC6A13Q9NSD5 602 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 IL36RNQ9UBH0 155 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 C7orf77A4D0Y5 90 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 ASPDHA6ND91 283 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 B4E171 279 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 C9JCJ5 164 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 TOX3O15405 576 aaPredicted RBP3.92□□□□□ -1.78
NCOA1-201ENST00000288599 MRPS14O60783 128 aaKnown RBP3.92□□□□□ -1.78
NCOA1-201ENST00000288599 NDUFB2O95178 105 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 CELA3BP08861 270 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 CA5AP35218 305 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 DLK1P80370 383 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 FABP9Q0Z7S8 132 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 PMS2P11Q13670 270 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 PHLDA2Q53GA4 152 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 DACT2Q5SW24 774 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 H3F3CQ6NXT2 135 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 LYPD4Q6UWN0 246 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 CLDN19Q8N6F1 224 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 OR10P1Q8NGE3 313 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 SPACA9Q96E40 222 aaPredicted RBP3.92□□□□□ -1.78
NCOA1-201ENST00000288599 PELI1Q96FA3 418 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 OR2V2Q96R30 315 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 LYSMD1Q96S90 227 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 PRSS22Q9GZN4 317 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 NECAP2Q9NVZ3 263 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 C1orf123Q9NWV4 160 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 TREM2Q9NZC2 230 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 NPAP1Q9NZP6 1156 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 CNIH4Q9P003 139 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 C5AR2Q9P296 337 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 U3KQ87 197 aa3.92□□□□□ -1.78
NCOA1-201ENST00000288599 SPAARA0A1B0GVQ0 90 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 A8MT66 165 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 SP1P08047 785 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ASAH2BP0C7U1 165 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 KCNE1P15382 129 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 LGALS3P17931 250 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 HTR2CP28335 458 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 CD70P32970 193 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 GP2P55259 537 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 TCL1AP56279 114 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 DSCR9P59020 149 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 RPS4XP62701 263 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 SNRPNP63162 240 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 SIGLEC14Q08ET2 396 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ZNF77Q15935 545 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 FAM166AQ6J272 317 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 UQCC3Q6UW78 93 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ACP7Q6ZNF0 438 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ZFAND4Q86XD8 727 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ZFP62Q8NB50 900 aaPredicted RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 GPR148Q8TDV2 347 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ARHGDIGQ99819 225 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 PRADC1Q9BSG0 188 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 SLC45A2Q9UMX9 530 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 CSNK1G3Q9Y6M4 447 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 TMEM56-RWDD3S4R434 201 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 MKI67P46013 3256 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 G3V3Q6 166 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 GLI4P10075 376 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 B4GALT1P15291 398 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 GATA4P43694 442 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 GPR18Q14330 331 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ZNF56Q15929 161 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 HNRNPA1L2Q32P51 320 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 PCSK4Q6UW60 755 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 C15orf39Q6ZRI6 1047 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 FCRLAQ7L513 359 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 KLHDC8AQ8IYD2 350 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 FAM89BQ8N5H3 189 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 Q8NFD4 153 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 FAM110DQ8TAY7 271 aaPredicted RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 YIPF5Q969M3 257 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 CHST6Q9GZX3 395 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 MRPL16Q9NX20 251 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 IGLV3-22A0A075B6J6 115 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 TMEM178BH3BS89 294 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 LANCL1O43813 399 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 DUS4LO95620 317 aaKnown RBP3.91□□□□□ -1.78
NCOA1-201ENST00000288599 MMP9P14780 707 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ACHEP22303 614 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 PRDX2P32119 198 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 MAS1LP35410 378 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 NPBWR2P48146 333 aa3.91□□□□□ -1.78
NCOA1-201ENST00000288599 ZP4Q12836 540 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms