RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 LSM5Q9Y4Y9 91 aaKnown RBP9.06□□□□□ -0.96
SKA1-201ENST00000285116 MMP24Q9Y5R2 645 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 ZNF292O60281 2723 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 ALPK2Q86TB3 2170 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 A0A087X0M5 115 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 A0A1B0GX30 115 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 E5RGE8 158 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 MASP2O00187 686 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST1H2BKO60814 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 DHRS3O75911 302 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST1H2BJP06899 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 NDUFB7P17568 137 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST1H2BOP23527 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST1H2BBP33778 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 PTGER4P35408 488 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 FHITP49789 147 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 FOXL2P58012 376 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST1H2BDP58876 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 RAB4BP61018 213 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST1H2BCP62807 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 ARFRP1Q13795 201 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 GAMTQ14353 236 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST2H2BEQ16778 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST3H2BBQ8N257 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 OR51T1Q8NGJ9 327 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 OR13D1Q8NGV5 346 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HAS2Q92819 552 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST1H2BHQ93079 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 LYZL4Q96KX0 146 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 LURAP1Q96LR2 239 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST1H2BNQ99877 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 HIST1H2BMQ99879 126 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 BANF2Q9H503 90 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 DCAF16Q9NXF7 216 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 EHFQ9NZC4 300 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 POLR1DQ9Y2S0 133 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 NSG2Q9Y328 171 aa9.06□□□□□ -0.96
SKA1-201ENST00000285116 A0A087WZY1 265 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 BTBD17A6NE02 478 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 PATE3B3GLJ2 98 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 TLX3O43711 291 aaPredicted RBP9.05□□□□□ -0.96
SKA1-201ENST00000285116 NKX6-1P78426 367 aaPredicted RBP9.05□□□□□ -0.96
SKA1-201ENST00000285116 ELOBQ15370 118 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 UBE2V2Q15819 145 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 HIKESHIQ53FT3 197 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 C1orf189Q5VU69 101 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 SPNS3Q6ZMD2 512 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 VDAC3Q9Y277 283 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 OR5H15A6NDH6 313 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 OR5H1A6NKK0 313 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 PTBP3O95758 552 aaKnown RBP9.05□□□□□ -0.96
SKA1-201ENST00000285116 KNG1P01042 644 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 DTYMKP23919 212 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 DHPSP49366 369 aaPredicted RBP9.05□□□□□ -0.96
SKA1-201ENST00000285116 H3F3AP84243 136 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 CHRFAM7AQ494W8 412 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 GPR157Q5UAW9 335 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 NELFAQ9H3P2 528 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 ZDHHC8Q9ULC8 765 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 SDK2Q58EX2 2172 aa9.05□□□□□ -0.96
SKA1-201ENST00000285116 ZNF726A6NNF4 738 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 ZNF724A8MTY0 619 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 SDCBPO00560 298 aaPredicted RBP9.04□□□□□ -0.96
SKA1-201ENST00000285116 RER1O15258 196 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 GPR137BO60478 399 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 HEXBP07686 556 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 QDPRP09417 244 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 ZNF43P17038 809 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 TAGLN2P37802 199 aaKnown RBP9.04□□□□□ -0.96
SKA1-201ENST00000285116 AFF3P51826 1226 aaKnown RBP9.04□□□□□ -0.96
SKA1-201ENST00000285116 MFAP5Q13361 173 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 KHDC3LQ587J8 217 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 GGNBP1Q5YKI7 109 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 CLEC9AQ6UXN8 241 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 ASCL4Q6XD76 172 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 FAM57BQ71RH2 274 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 SGPP2Q8IWX5 399 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 TMEM156Q8N614 296 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 GJC3Q8NFK1 279 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 Q8WTZ3 238 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 FAM71F1Q96KD3 344 aaPredicted RBP9.04□□□□□ -0.96
SKA1-201ENST00000285116 Q96M66 194 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 SPACA5Q96QH8 159 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 GPER1Q99527 375 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 SOX7Q9BT81 388 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 ST6GALNAC5Q9BVH7 336 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 GPR61Q9BZJ8 451 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 SIRT7Q9NRC8 400 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 FAM86C1Q9NVL1 165 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 KLRF1Q9NZS2 232 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 KIAA1549Q9HCM3 1950 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 TRBV11-1A0A0K0K1C0 115 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 A0A1W2PP11 408 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 H3BML4 177 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 H3BQ15 152 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 RAMP1O60894 148 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 C1QL1O75973 258 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 ZFAND5O76080 213 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 SOD3P08294 240 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms