RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SUMO3P55854 103 aaPredicted RBP9□□□□□ -0.97
UPF3B-201ENST00000276201 SLC35A1P78382 337 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 IL13RA2Q14627 380 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 KCNMB1Q16558 191 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 OR2A2Q6IF42 318 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 H1FNTQ75WM6 255 aaPredicted RBP9□□□□□ -0.97
UPF3B-201ENST00000276201 FAM219AQ8IW50 185 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 ADPRHL1Q8NDY3 354 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 OR13C9Q8NGT0 318 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 OR13D1Q8NGV5 346 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 TMEM234Q8WY98 164 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 ST8SIA1Q92185 356 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 IMMP1LQ96LU5 166 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 ADOQ96SZ5 270 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 CHST5Q9GZS9 411 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 OR10A2Q9H208 303 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 C19orf25Q9UFG5 118 aaPredicted RBP9□□□□□ -0.97
UPF3B-201ENST00000276201 NPIPA5E9PKD4 350 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 TXNL1O43396 289 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 TGOLN2O43493 480 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF354AO60765 605 aaPredicted RBP9□□□□□ -0.97
UPF3B-201ENST00000276201 IFNA10P01566 189 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 GLRA1P23415 457 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 KRBOX4Q5JUW0 171 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 RPUSD3Q6P087 351 aaKnown RBP9□□□□□ -0.97
UPF3B-201ENST00000276201 SLC16A14Q7RTX9 510 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 SGPP2Q8IWX5 399 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF441Q8N8Z8 693 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 OR10H5Q8NGA6 315 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 OR10S1Q8NGN2 331 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 HPSE2Q8WWQ2 592 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 NTNG2Q96CW9 530 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 MUCL1Q96DR8 90 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 GALNT14Q96FL9 552 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 ARHGAP5-AS1Q96IT6 56 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 THOC3Q96J01 351 aaKnown RBP9□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF552Q9H707 407 aaPredicted RBP9□□□□□ -0.97
UPF3B-201ENST00000276201 KCNJ16Q9NPI9 418 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 NPIPA1Q9UND3 350 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF462Q96JM2 2506 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 ELOA3CA0A087WX78 387 aaPredicted RBP8.99□□□□□ -0.97
UPF3B-201ENST00000276201 H7C1Q1 480 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 M0R036 132 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 ETV2O00321 342 aaPredicted RBP8.99□□□□□ -0.97
UPF3B-201ENST00000276201 ADAM10O14672 748 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 SERPINA7P05543 415 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 CTSSP25774 331 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 SNU13P55769 128 aaKnown RBP8.99□□□□□ -0.97
UPF3B-201ENST00000276201 CSNK2A1P68400 391 aaPredicted RBP8.99□□□□□ -0.97
UPF3B-201ENST00000276201 HIKESHIQ53FT3 197 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 SP5Q6BEB4 398 aaPredicted RBP8.99□□□□□ -0.97
UPF3B-201ENST00000276201 DOK3Q7L591 496 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF565Q8N9K5 539 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 TMEM104Q8NE00 496 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 CSNK2A3Q8NEV1 391 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 C11orf40Q8WZ69 217 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 CHST11Q9NPF2 352 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 SIRT7Q9NRC8 400 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 BSNQ9UPA5 3926 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 hCG_1809904A0A1W2PP81 198 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 A0A1W2PR64 198 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 A0A1W2PRV1 198 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF878C9JN71 531 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 K7N7A8 449 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 AGPAT2O15120 278 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 IGLV3-1P01715 115 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 CAMLGP49069 296 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 RPS23P62266 143 aaKnown RBP8.99□□□□□ -0.97
UPF3B-201ENST00000276201 OTPQ5XKR4 325 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 GGNBP1Q5YKI7 109 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 LINC00346Q8IVM7 164 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 PECRQ9BY49 303 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 TBL1XR1Q9BZK7 514 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 CENPMQ9NSP4 180 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 EHFQ9NZC4 300 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 GSKIPQ9P0R6 139 aa8.99□□□□□ -0.97
UPF3B-201ENST00000276201 ALPK2Q86TB3 2170 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 ANKUB1A6NFN9 424 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 SEC14L6B5MCN3 397 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 SFTPBP07988 381 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 APOBEC1P41238 236 aaKnown RBP8.98□□□□□ -0.97
UPF3B-201ENST00000276201 HSF1Q00613 529 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 ARFRP1Q13795 201 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 THEM4Q5T1C6 240 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 RTN4RL2Q86UN3 420 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 C9orf40Q8IXQ3 194 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 FAM24BQ8N5W8 94 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF321PQ8N8H1 164 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 PSMF1Q92530 271 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 SUCNR1Q9BXA5 334 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 MRPL13Q9BYD1 178 aaKnown RBP8.98□□□□□ -0.97
UPF3B-201ENST00000276201 OR2C1O95371 312 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 GPX4P36969 197 aaPredicted RBP8.98□□□□□ -0.97
UPF3B-201ENST00000276201 OR3A4PP47883 348 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 CHRFAM7AQ494W8 412 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 ADAM5Q6NVV9 412 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 SULF2Q8IWU5 870 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 ERGIC1Q969X5 290 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 C10orf35Q96D05 121 aa8.98□□□□□ -0.97
UPF3B-201ENST00000276201 SYT3Q9BQG1 590 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms