RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 IGSF11Q5DX21 431 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 NHLRC3Q5JS37 347 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 LY6G6FQ5SQ64 297 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 LILRB2Q8N423 598 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 SCGB1C1Q8TD33 95 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 ZC3H10Q96K80 434 aaKnown RBP10.93□□□□□ -0.66
UBXN4-201ENST00000272638 PIGMQ9H3S5 423 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 WDR54Q9H977 334 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 KCNJ16Q9NPI9 418 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 TRAV14DV4A0A0A6YYC5 116 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 DEGS1O15121 323 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 IAPPP10997 89 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 ZNF14P17017 642 aaPredicted RBP10.93□□□□□ -0.66
UBXN4-201ENST00000272638 IL2RGP31785 369 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 NKX2-1P43699 371 aaPredicted RBP10.93□□□□□ -0.66
UBXN4-201ENST00000272638 FUT6P51993 359 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 MRPS34P82930 218 aaKnown RBP10.93□□□□□ -0.66
UBXN4-201ENST00000272638 TGFBR3Q03167 851 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 TFAP2EQ6VUC0 442 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 PPP1R32Q7Z5V6 425 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 ZDHHC23Q8IYP9 409 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 SPSB1Q96BD6 273 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 URGCP-MRPS24S4R325 110 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 IGKV1D-8A0A087WSZ0 117 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 A0A1W2PNV4 684 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 EIF3GO75821 320 aaKnown RBP eCLIP10.93□□□□□ -0.66
UBXN4-201ENST00000272638 IGHMP01871 453 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 SELEP16581 610 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 TUBG1P23258 451 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 FOXG1P55316 489 aaPredicted RBP10.93□□□□□ -0.66
UBXN4-201ENST00000272638 AKR1C8PQ5T2L2 129 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 ZFP62Q8NB50 900 aaPredicted RBP10.93□□□□□ -0.66
UBXN4-201ENST00000272638 RFESDQ8TAC1 157 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 FGFBP3Q8TAT2 258 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 SIGLEC12Q96PQ1 595 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 FAM173AQ9BQD7 235 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 FOXJ2Q9P0K8 574 aa10.93□□□□□ -0.66
UBXN4-201ENST00000272638 FAM24AA6NFZ4 105 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 CD300LBA8K4G0 201 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 ZP3P21754 424 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 PTGDSP41222 190 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 POLR2GP62487 172 aaKnown RBP eCLIP10.92□□□□□ -0.66
UBXN4-201ENST00000272638 FAM27BQ5VT28 67 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 PRRX2Q99811 253 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 STARD10Q9Y365 291 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 B3GALNT1O75752 331 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 IFNA5P01569 189 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 BCL3P20749 454 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 AADACP22760 399 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 TMEM33P57088 247 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 TRA2AQ13595 282 aaKnown RBP eCLIP10.92□□□□□ -0.666e-9■■■■□ 23.6
UBXN4-201ENST00000272638 OR8U1Q8NH10 309 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 NANOS1Q8WY41 292 aaKnown RBP10.92□□□□□ -0.66
UBXN4-201ENST00000272638 AKR1E2Q96JD6 320 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 LYZL4Q96KX0 146 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 IMMP1LQ96LU5 166 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 FER1L6-AS2Q96M78 137 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 RAB2AP61019 212 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 HAGHQ16775 308 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 RTL6Q6ICC9 239 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 OR8G2PQ6IF36 304 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 ATRAIDQ6UW56 229 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 HOGA1Q86XE5 327 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 CLDN23Q96B33 292 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 ALX4Q9H161 411 aaPredicted RBP10.92□□□□□ -0.66
UBXN4-201ENST00000272638 GHRLQ9UBU3 117 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 GPR132Q9UNW8 380 aa10.92□□□□□ -0.66
UBXN4-201ENST00000272638 RCL1Q9Y2P8 373 aaKnown RBP10.92□□□□□ -0.66
UBXN4-201ENST00000272638 DAOP14920 347 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 TAGLNQ01995 201 aaKnown RBP10.91□□□□□ -0.66
UBXN4-201ENST00000272638 RHOFQ9HBH0 211 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 FAM212BQ9NTI7 297 aaPredicted RBP10.91□□□□□ -0.66
UBXN4-201ENST00000272638 DEPPQ9NTK1 212 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 MED13Q9UHV7 2174 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 PDCD6O75340 191 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 ZNF735P0CB33 412 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 P2RY4P51582 365 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 PDZK1IP1Q13113 114 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 IZUMO4Q1ZYL8 232 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 RGS7BPQ6MZT1 257 aaPredicted RBP10.91□□□□□ -0.66
UBXN4-201ENST00000272638 DEFB124Q8NES8 71 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 OR2G3Q8NGZ4 309 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 KCNIP1Q9NZI2 227 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 DNAJB11Q9UBS4 358 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 SPAARA0A1B0GVQ0 90 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 SLC22A20A6NK97 555 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 TIMM8AO60220 97 aaPredicted RBP10.91□□□□□ -0.66
UBXN4-201ENST00000272638 GP1BAP07359 652 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 CALCRP30988 508 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 PEA15Q15121 130 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 DCAF10Q5QP82 559 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 OR2M7Q8NG81 312 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 OR10AD1Q8NGE0 317 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 OR6S1Q8NH40 331 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 SFT2D1Q8WV19 159 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 IL36RNQ9UBH0 155 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 ERRFI1Q9UJM3 462 aaPredicted RBP10.91□□□□□ -0.66
UBXN4-201ENST00000272638 AMDHD2Q9Y303 409 aa10.91□□□□□ -0.66
UBXN4-201ENST00000272638 LNP1A1A4G5 178 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 PINLYPA6NC86 204 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms