RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 RCL1Q9Y2P8 373 aaKnown RBP13.55□□□□□ -0.24
TIMP3-201ENST00000266085 DOCK8Q8NF50 2099 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 SBF1O95248 1867 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 FHL5Q5TD97 284 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 BHLHA15Q7RTS1 189 aaPredicted RBP13.55□□□□□ -0.24
TIMP3-201ENST00000266085 ADAM19Q9H013 955 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 CXXC4Q9H2H0 198 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 V9GYH0 126 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 GREB1Q4ZG55 1949 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 MED12Q93074 2177 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 SOCS1O15524 211 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 TXNL1O43396 289 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 P2RX3P56373 397 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 C20orf24Q9BUV8 137 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 RASL12Q9NYN1 266 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 NTMQ9P121 344 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 ANXA10Q9UJ72 324 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 AMDHD2Q9Y303 409 aa13.55□□□□□ -0.24
TIMP3-201ENST00000266085 C9orf170A2RU37 121 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 HSBP1L1C9JCN9 74 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 COL19A1Q14993 1142 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 TRAT1Q6PIZ9 186 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 LYG1Q8N1E2 194 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 PSG11Q9UQ72 335 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 ZNF236Q9UL36 1845 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 GGTLC2Q14390 218 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 TMEM41BQ5BJD5 291 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 PECRQ9BY49 303 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 TINAGQ9UJW2 476 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 URGCP-MRPS24S4R325 110 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 DCTN6O00399 190 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 GSTZ1O43708 216 aaPredicted RBP13.54□□□□□ -0.24
TIMP3-201ENST00000266085 OR7C2O60412 319 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 HRASP01112 189 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 MGAT2Q10469 447 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 HABP2Q14520 560 aaPredicted RBP13.54□□□□□ -0.24
TIMP3-201ENST00000266085 AVPI1Q5T686 147 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 NHLRC1Q6VVB1 395 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 ZNF251Q9BRH9 671 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 DSPPQ9NZW4 1301 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 AGFG2O95081 481 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 RPL11P62913 178 aaKnown RBP13.54□□□□□ -0.24
TIMP3-201ENST00000266085 SSX2Q16385 188 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 ZBTB37Q5TC79 503 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 FAM27BQ5VT28 67 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 ADAM5Q6NVV9 412 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 GPX7Q96SL4 187 aaPredicted RBP13.54□□□□□ -0.24
TIMP3-201ENST00000266085 CHRNA10Q9GZZ6 450 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 RLFQ13129 1914 aa13.54□□□□□ -0.24
TIMP3-201ENST00000266085 RALGAPA2Q2PPJ7 1873 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 ZNF727A8MUV8 499 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 UMAD1C9J7I0 102 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 H7BYZ3 331 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 TXNDC12O95881 172 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 OR10J4P0C629 311 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 OR3A1P47881 315 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 OR5D13Q8NGL4 314 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 POM121L2Q96KW2 1035 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 TMEM231Q9H6L2 316 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 ST6GALNAC2Q9UJ37 374 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 DEFB108AA8MXU0 73 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 PNPP00491 289 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 NANOS3P60323 173 aaKnown RBP13.53□□□□□ -0.24
TIMP3-201ENST00000266085 UBE2G1P62253 170 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 IGLV3-21P80748 117 aaPredicted RBP13.53□□□□□ -0.24
TIMP3-201ENST00000266085 IGFBP7Q16270 282 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 ZNF787Q6DD87 383 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 TEX261Q6UWH6 196 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 UBAC2Q8NBM4 344 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 OR10AD1Q8NGE0 317 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 CHST5Q9GZS9 411 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 NAA60Q9H7X0 242 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 GNB4Q9HAV0 340 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 U3KQ87 197 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 CDIPTO14735 213 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 PCOLCEQ15113 449 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 MPPED2Q15777 294 aa13.53□□□□□ -0.24
TIMP3-201ENST00000266085 GMPPAQ96IJ6 420 aaPredicted RBP13.53□□□□□ -0.24
TIMP3-201ENST00000266085 AKIRIN1Q9H9L7 192 aaPredicted RBP13.53□□□□□ -0.24
TIMP3-201ENST00000266085 hADV38S2A0JD32 116 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 IGKV3-11P04433 115 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 CD3EP07766 207 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 COX6A1P12074 109 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 VMA21Q3ZAQ7 101 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 MOB3BQ86TA1 216 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 OR10Z1Q8NGY1 313 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 PRR7Q8TB68 274 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 SIRT4Q9Y6E7 314 aaPredicted RBP13.52□□□□□ -0.24
TIMP3-201ENST00000266085 CACNA1DQ01668 2161 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 ZNF705GA8MUZ8 300 aaPredicted RBP13.52□□□□□ -0.24
TIMP3-201ENST00000266085 FLI1Q01543 452 aaPredicted RBP13.52□□□□□ -0.24
TIMP3-201ENST00000266085 PXDC1Q5TGL8 231 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 STUMQ69YW2 141 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 FAM122CQ6P4D5 195 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 MRGPRDQ8TDS7 321 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 MAP6Q96JE9 813 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 SLC7A10Q9NS82 523 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 KLHDC2Q9Y2U9 406 aa13.52□□□□□ -0.24
TIMP3-201ENST00000266085 C3orf85A0A1B0GTC6 90 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms