RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 AANATQ16613 207 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 C4orf17Q53FE4 359 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 CTDSP1Q9GZU7 261 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 NTMQ9P121 344 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 IGHV1-45A0A0A0MS14 117 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 A0A1W2PRD5 423 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 A0A1W2PRF3 423 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 A0A1W2PRM7 423 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 ICMTO60725 284 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 S100A8P05109 93 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 OR5AC1P0C628 307 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 AVPR2P30518 371 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 LGALS7P47929 136 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 FABP9Q0Z7S8 132 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 RPEL1Q2QD12 228 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF528Q3MIS6 628 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 LINC00596Q86U02 117 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 TBC1D26Q86UD7 250 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF441Q8N8Z8 693 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 C10orf35Q96D05 121 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF764Q96H86 408 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-201ENST00000254630 MED30Q96HR3 178 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 GMPPAQ96IJ6 420 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-201ENST00000254630 MMP26Q9NRE1 261 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 RASL12Q9NYN1 266 aa7.7□□□□□ -1.18
PTCD3-201ENST00000254630 MRM2Q9UI43 246 aaKnown RBP7.7□□□□□ -1.18
PTCD3-201ENST00000254630 CYR61O00622 381 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 AKR7A2O43488 359 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 FNDC7Q5VTL7 733 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF429Q86V71 674 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF665Q9H7R5 613 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 CES1P1Q9UKY3 287 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 OR4A8P0C604 315 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 MPGP29372 298 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 OR2B8PP59922 312 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 RHOBP62745 196 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 FOXO1Q12778 655 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 MRM1Q6IN84 353 aaKnown RBP7.69□□□□□ -1.18
PTCD3-201ENST00000254630 THSD4Q6ZMP0 1018 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 C9orf40Q8IXQ3 194 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 ZG16BQ96DA0 208 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 C10orf90Q96M02 699 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 DOK5Q9P104 306 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 RNF7Q9UBF6 113 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 OR2M5A3KFT3 312 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 FCER1GP30273 86 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 GALR1P47211 349 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 LSM6P62312 80 aaKnown RBP7.69□□□□□ -1.18
PTCD3-201ENST00000254630 OR4S2Q8NH73 311 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 RFESDQ8TAC1 157 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 WDFY2Q96P53 400 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 SAP30LQ9HAJ7 183 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 RHOFQ9HBH0 211 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF586Q9NXT0 402 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 CACNG5Q9UF02 275 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 SLC45A2Q9UMX9 530 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 NEU3Q9UQ49 428 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 COLQQ9Y215 455 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-201ENST00000254630 MRPS18BQ9Y676 258 aaKnown RBP7.69□□□□□ -1.18
PTCD3-201ENST00000254630 POMT1Q9Y6A1 747 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 CDC42EP2O14613 210 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 ZFPL1O95159 310 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 IGHV3-13P01766 116 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 IGHV3-7P01780 117 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 SUMO1P63165 101 aaKnown RBP7.69□□□□□ -1.18
PTCD3-201ENST00000254630 PPP1R1AQ13522 171 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 PMS2CLQ68D20 193 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 SLC25A40Q8TBP6 338 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 CCL21O00585 134 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 ARG1P05089 322 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 PTHLHP12272 177 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 PMELP40967 661 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 TMPRSS3P57727 454 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 ST3GAL2Q16842 350 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 MOGAT2Q3SYC2 334 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 MIDNQ504T8 468 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 ADTRPQ96IZ2 230 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 CABLES2Q9BTV7 478 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 IL36GQ9NZH8 169 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 TRAPPC1Q9Y5R8 145 aa7.69□□□□□ -1.18
PTCD3-201ENST00000254630 IGHA1P01876 353 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 IGHV4-34P06331 123 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 ACSM4P0C7M7 580 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 GNG4P50150 75 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 TPPP2P59282 170 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 TAGLNQ01995 201 aaKnown RBP7.68□□□□□ -1.18
PTCD3-201ENST00000254630 IL13RA2Q14627 380 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 GGNBP1Q5YKI7 109 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 ADAM5Q6NVV9 412 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 FA2HQ7L5A8 372 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 R3HDM4Q96D70 268 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 NPTNQ9Y639 398 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 PARP14Q460N5 1801 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 SOX15O60248 233 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 SPINK2P20155 84 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 SSX1Q16384 188 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 DGAT2L6Q6ZPD8 337 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 OR8D4Q8NGM9 314 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 ABHD3Q8WU67 409 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 GSX2Q9BZM3 304 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms