RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 GJC3Q8NFK1 279 aa8.79□□□□□ -1
COPB1-201ENST00000249923 ZNF799Q96GE5 643 aa8.79□□□□□ -1
COPB1-201ENST00000249923 FREM1Q5H8C1 2179 aa8.79□□□□□ -1
COPB1-201ENST00000249923 DHHO43323 396 aa8.79□□□□□ -1
COPB1-201ENST00000249923 SYNGR3O43761 229 aa8.79□□□□□ -1
COPB1-201ENST00000249923 RFPL3SP0C7P2 107 aa8.79□□□□□ -1
COPB1-201ENST00000249923 HKR1P10072 659 aa8.79□□□□□ -1
COPB1-201ENST00000249923 SUCLG1P53597 346 aaKnown RBP8.79□□□□□ -1
COPB1-201ENST00000249923 Q0VFX4 171 aa8.79□□□□□ -1
COPB1-201ENST00000249923 ACER2Q5QJU3 275 aa8.79□□□□□ -1
COPB1-201ENST00000249923 C5orf24Q7Z6I8 188 aa8.79□□□□□ -1
COPB1-201ENST00000249923 ADAMTS17Q8TE56 1095 aa8.79□□□□□ -1
COPB1-201ENST00000249923 EMG1Q92979 244 aaKnown RBP8.79□□□□□ -1
COPB1-201ENST00000249923 FAAP24Q9BTP7 215 aa8.79□□□□□ -1
COPB1-201ENST00000249923 MAGT1Q9H0U3 335 aa8.79□□□□□ -1
COPB1-201ENST00000249923 DECR2Q9NUI1 292 aa8.79□□□□□ -1
COPB1-201ENST00000249923 CACNA1GO43497 2377 aa8.79□□□□□ -1
COPB1-201ENST00000249923 C7orf77A4D0Y5 90 aa8.78□□□□□ -1
COPB1-201ENST00000249923 FAM157AC9JC47 383 aa8.78□□□□□ -1
COPB1-201ENST00000249923 ZNF774Q6NX45 483 aa8.78□□□□□ -1
COPB1-201ENST00000249923 DHRS11Q6UWP2 260 aa8.78□□□□□ -1
COPB1-201ENST00000249923 PLXDC2Q6UX71 529 aa8.78□□□□□ -1
COPB1-201ENST00000249923 GGNQ86UU5 652 aa8.78□□□□□ -1
COPB1-201ENST00000249923 OR5L1Q8NGL2 311 aa8.78□□□□□ -1
COPB1-201ENST00000249923 FNDC9Q8TBE3 224 aa8.78□□□□□ -1
COPB1-201ENST00000249923 GPHA2Q96T91 129 aa8.78□□□□□ -1
COPB1-201ENST00000249923 URM1Q9BTM9 101 aaKnown RBP8.78□□□□□ -1
COPB1-201ENST00000249923 WDR54Q9H977 334 aa8.78□□□□□ -1
COPB1-201ENST00000249923 PILRBQ9UKJ0 227 aa8.78□□□□□ -1
COPB1-201ENST00000249923 NXT1Q9UKK6 140 aaKnown RBP8.78□□□□□ -1
COPB1-201ENST00000249923 MEMO1Q9Y316 297 aa8.78□□□□□ -1
COPB1-201ENST00000249923 CCDC187A0A096LP49 1063 aa8.78□□□□□ -1
COPB1-201ENST00000249923 CDRT15L2A8MXV6 281 aa8.78□□□□□ -1
COPB1-201ENST00000249923 WRBO00258 174 aa8.78□□□□□ -1
COPB1-201ENST00000249923 TERTO14746 1132 aaKnown RBP8.78□□□□□ -1
COPB1-201ENST00000249923 NDUFA2O43678 99 aa8.78□□□□□ -1
COPB1-201ENST00000249923 TMEM225BP0DP42 221 aa8.78□□□□□ -1
COPB1-201ENST00000249923 RPL12P30050 165 aaKnown RBP8.78□□□□□ -1
COPB1-201ENST00000249923 LYSMD4Q5XG99 296 aa8.78□□□□□ -1
COPB1-201ENST00000249923 SLC23A3Q6PIS1 610 aa8.78□□□□□ -1
COPB1-201ENST00000249923 ZFP62Q8NB50 900 aaPredicted RBP8.78□□□□□ -1
COPB1-201ENST00000249923 IFI44Q8TCB0 444 aa8.78□□□□□ -1
COPB1-201ENST00000249923 ZNF2Q9BSG1 426 aaPredicted RBP8.78□□□□□ -1
COPB1-201ENST00000249923 CNTNAP3Q9BZ76 1288 aa8.78□□□□□ -1
COPB1-201ENST00000249923 CRLF2Q9HC73 371 aa8.78□□□□□ -1
COPB1-201ENST00000249923 LPAR3Q9UBY5 353 aa8.78□□□□□ -1
COPB1-201ENST00000249923 MEX3AA1L020 520 aaKnown RBP8.78□□□□□ -1
COPB1-201ENST00000249923 OR2C1O95371 312 aa8.78□□□□□ -1
COPB1-201ENST00000249923 IFNA2P01563 188 aa8.78□□□□□ -1
COPB1-201ENST00000249923 NOVA1P51513 510 aaKnown RBP8.78□□□□□ -1
COPB1-201ENST00000249923 TAF9Q16594 264 aa8.78□□□□□ -1
COPB1-201ENST00000249923 PIGYQ3MUY2 71 aa8.78□□□□□ -1
COPB1-201ENST00000249923 SOHLH1Q5JUK2 328 aa8.78□□□□□ -1
COPB1-201ENST00000249923 UQCC3Q6UW78 93 aa8.78□□□□□ -1
COPB1-201ENST00000249923 SULF2Q8IWU5 870 aa8.78□□□□□ -1
COPB1-201ENST00000249923 MRPL24Q96A35 216 aaKnown RBP8.78□□□□□ -1
COPB1-201ENST00000249923 C2orf50Q96LR7 162 aa8.78□□□□□ -1
COPB1-201ENST00000249923 ALKBH3Q96Q83 286 aaPredicted RBP8.78□□□□□ -1
COPB1-201ENST00000249923 DUSP23Q9BVJ7 150 aa8.78□□□□□ -1
COPB1-201ENST00000249923 PLEK2Q9NYT0 353 aa8.78□□□□□ -1
COPB1-201ENST00000249923 AK3Q9UIJ7 227 aa8.78□□□□□ -1
COPB1-201ENST00000249923 ZDHHC8Q9ULC8 765 aa8.78□□□□□ -1
COPB1-201ENST00000249923 PTRH2Q9Y3E5 179 aaKnown RBP8.78□□□□□ -1
COPB1-201ENST00000249923 DOCK10Q96BY6 2186 aa8.77□□□□□ -1
COPB1-201ENST00000249923 EPHA1P21709 976 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 G0S2P27469 103 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 KRTAP27-1Q3LI81 207 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 TMEM268Q5VZI3 342 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 SUMF2Q8NBJ7 301 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 NECAP1Q8NC96 275 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 MAFAQ8NHW3 353 aaPredicted RBP8.77□□□□□ -1.01
COPB1-201ENST00000249923 PP6455Q8WZ26 134 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 THOC3Q96J01 351 aaKnown RBP8.77□□□□□ -1.01
COPB1-201ENST00000249923 SMIM8Q96KF7 97 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 CRIM1Q9NZV1 1036 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 FBXL17Q9UF56 701 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 C19orf25Q9UFG5 118 aaPredicted RBP8.77□□□□□ -1.01
COPB1-201ENST00000249923 RFNGQ9Y644 331 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 FAM230AA0A1W2PPH8 454 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 CXorf65A6NEN9 183 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 ZNF716A6NP11 495 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 SERPINE3A8MV23 424 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 ZNF587BE7ETH6 402 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 H3BP45 60 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 PHOX2AO14813 284 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 PDGFBP01127 241 aaPredicted RBP8.77□□□□□ -1.01
COPB1-201ENST00000249923 TAGLN2P37802 199 aaKnown RBP8.77□□□□□ -1.01
COPB1-201ENST00000249923 GLP1RP43220 463 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 DSCR4P56555 118 aaPredicted RBP8.77□□□□□ -1.01
COPB1-201ENST00000249923 MLF1P58340 268 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 RPS18P62269 152 aaKnown RBP8.77□□□□□ -1.01
COPB1-201ENST00000249923 CYCSP99999 105 aaKnown RBP8.77□□□□□ -1.01
COPB1-201ENST00000249923 FAM27BQ5VT28 67 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 ERGIC1Q969X5 290 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 PRO3102Q9H379 93 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 PLEKHJ1Q9NW61 149 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 KIAA2026Q5HYC2 2103 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 SCAF4O95104 1147 aaKnown RBP8.77□□□□□ -1.01
COPB1-201ENST00000249923 FABP4P15090 132 aa8.77□□□□□ -1.01
COPB1-201ENST00000249923 B4GALT1P15291 398 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms