RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 ZNF205O95201 554 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 FARS2O95363 451 aaKnown RBP14.21□□□□□ -0.13
HOXD3-201ENST00000249440 F12P00748 615 aaPredicted RBP14.21□□□□□ -0.13
HOXD3-201ENST00000249440 MBPP02686 304 aaPredicted RBP14.21□□□□□ -0.13
HOXD3-201ENST00000249440 SWI5Q1ZZU3 235 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 PEAR1Q5VY43 1037 aaPredicted RBP14.21□□□□□ -0.13
HOXD3-201ENST00000249440 BTNL8Q6UX41 500 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 SKA3Q8IX90 412 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 CPNE4Q96A23 557 aaPredicted RBP14.21□□□□□ -0.13
HOXD3-201ENST00000249440 MARS2Q96GW9 593 aaKnown RBP14.21□□□□□ -0.13
HOXD3-201ENST00000249440 TCFL5Q9UL49 500 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 MRPS18CQ9Y3D5 142 aaKnown RBP14.21□□□□□ -0.13
HOXD3-201ENST00000249440 POMT1Q9Y6A1 747 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 FAM221AA4D161 298 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 LRRC3CA6NJW4 275 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 PDCD6O75340 191 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 RPS18P62269 152 aaKnown RBP14.21□□□□□ -0.13
HOXD3-201ENST00000249440 Q0VFX4 171 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 LIAT1Q6ZQX7 453 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 FGFBP3Q8TAT2 258 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 SMIM3Q9BZL3 60 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 MLXQ9UH92 298 aa14.21□□□□□ -0.13
HOXD3-201ENST00000249440 ZNF318Q5VUA4 2279 aa14.21□□□□□ -0.14
HOXD3-201ENST00000249440 NDUFA2O43678 99 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 CD5P06127 495 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 GLP1RP43220 463 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 NPBWR1P48145 328 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 UCP3P55916 312 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 PHLDA2Q53GA4 152 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 ACER2Q5QJU3 275 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 DCAF12Q5T6F0 453 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 TMEM211Q6ICI0 200 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 Q6ZRG5 221 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 LYZL2Q7Z4W2 148 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 ESX1Q8N693 406 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 OR10Z1Q8NGY1 313 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 SLC39A7Q92504 469 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 SHANK1Q9Y566 2161 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 CELSR3Q9NYQ7 3312 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 B4E171 279 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 H7C1Q1 480 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 CYTIPO60759 359 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 SFTA3P0C7M3 94 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 GDF1P27539 372 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 TSPAN7P41732 249 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 CYB561P49447 251 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 CLDN15P56746 228 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 RBM11P57052 281 aaKnown RBP14.2□□□□□ -0.14
HOXD3-201ENST00000249440 FAM76BQ5HYJ3 339 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 RAB11FIP2Q7L804 512 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 LGI3Q8N145 548 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 MOB3AQ96BX8 217 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 C18orf12Q96KH6 178 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 ZNF442Q9H7R0 627 aa14.2□□□□□ -0.14
HOXD3-201ENST00000249440 FAM212BQ9NTI7 297 aaPredicted RBP14.2□□□□□ -0.14
HOXD3-201ENST00000249440 FUT3P21217 361 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 DUSP1P28562 367 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 PMELP40967 661 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 DVL1P1P54792 670 aaPredicted RBP14.19□□□□□ -0.14
HOXD3-201ENST00000249440 NRN1LQ496H8 165 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 TRIM61Q5EBN2 209 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 TSPO2Q5TGU0 170 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 GPR157Q5UAW9 335 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.19□□□□□ -0.14
HOXD3-201ENST00000249440 CCDC71LQ8N9Z2 235 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 LYPD6BQ8NI32 183 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 GLYATL2Q8WU03 294 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 ABHD3Q8WU67 409 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 ERGIC1Q969X5 290 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 SPSB4Q96A44 273 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 POM121Q96HA1 1249 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 C1QTNF5Q9BXJ0 243 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 PRDM14Q9GZV8 571 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 PARPBPQ9NWS1 579 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 STARD10Q9Y365 291 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 BORCS7-ASMTA0A0B4J1R7 106 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 MMP7P09237 267 aaPredicted RBP14.19□□□□□ -0.14
HOXD3-201ENST00000249440 CD80P33681 288 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 HERV-K104P61576 105 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 ZNF611Q8N823 705 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 OR5L1Q8NGL2 311 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 MSI2Q96DH6 328 aaKnown RBP14.19□□□□□ -0.14
HOXD3-201ENST00000249440 DEPPQ9NTK1 212 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 PLA2G2EQ9NZK7 142 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 FBXO9Q9UK97 447 aaPredicted RBP14.19□□□□□ -0.14
HOXD3-201ENST00000249440 KMT2EQ8IZD2 1858 aa14.19□□□□□ -0.14
HOXD3-201ENST00000249440 AGPAT2O15120 278 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 OR7C1O76099 320 aaPredicted RBP14.18□□□□□ -0.14
HOXD3-201ENST00000249440 HEXAP06865 529 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 EDN3P14138 238 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 SSPNQ14714 243 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 CALHM1Q8IU99 346 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 ZNF845Q96IR2 970 aaPredicted RBP14.18□□□□□ -0.14
HOXD3-201ENST00000249440 RSRP1Q9BUV0 290 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 ARV1Q9H2C2 271 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 ASPMQ8IZT6 3477 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 GPR137BO60478 399 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 DIRAS3O95661 229 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 SEC11BP0C7V7 166 aa14.18□□□□□ -0.14
HOXD3-201ENST00000249440 GFRA1P56159 465 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms