RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 LAMP3Q9UQV4 416 aa12.42□□□□□ -0.42
PCDHB3-201ENST00000231130 TMEM14DPA8MWL7 114 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 MS4A18H0YCH9 400 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 DXOO77932 396 aaKnown RBP12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 HNF1AP20823 631 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 MMP16P51512 607 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 NOVA1P51513 510 aaKnown RBP12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 HSF1Q00613 529 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 MS4A18Q3C1V0 323 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 OGFOD3Q6PK18 319 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 MEX3BQ6ZN04 569 aaKnown RBP12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 C9orf40Q8IXQ3 194 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 SCGB3A2Q96PL1 93 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 HIST1H2AAQ96QV6 131 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 LRFN1Q9P244 771 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 AK3Q9UIJ7 227 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 TCRBV21S2A2A0A5A6 115 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 TLCD2A6NGC4 264 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 ZNF850A8MQ14 1090 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 AQP7O14520 342 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 SRSF10O75494 262 aaKnown RBP12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 MT-ATP6P00846 226 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 CHRM2P08172 466 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 TMEM225BP0DP42 221 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 PNLIPP16233 465 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 TSPAN7P41732 249 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 CST9LP1Q5W188 147 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 Q7L0L9 218 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 DYRK2Q92630 601 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 C1orf123Q9NWV4 160 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 CCDC187A0A096LP49 1063 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 RPS2P15880 293 aaKnown RBP12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 CFPP27918 469 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 ARL4DP49703 201 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 TMEM183AQ8IXX5 376 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 TMEM156Q8N614 296 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 OR8B12Q8NGG6 310 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 OR5L1Q8NGL2 311 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 OR10S1Q8NGN2 331 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 STT3BQ8TCJ2 826 aa12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 FOXD3Q9UJU5 478 aaPredicted RBP12.41□□□□□ -0.42
PCDHB3-201ENST00000231130 A0A1W2PNR3 127 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 ZFP92A6NM28 416 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 ISG15P05161 165 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 GLIPR1P48060 266 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 CLRN1P58418 232 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 ERVFC1-1P60608 527 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 HSD11B2P80365 405 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 IQCJQ1A5X6 159 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 TMEM92Q6UXU6 159 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 CPEB3Q8NE35 698 aaKnown RBP12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 OR5T1Q8NG75 326 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 OR1P1Q8NH06 330 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 RNF133Q8WVZ7 376 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 PTX4Q96A99 478 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 CCNL2Q96S94 520 aaPredicted RBP12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 PLEKHJ1Q9NW61 149 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 COPS7AQ9UBW8 275 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 RALGAPA1Q6GYQ0 2036 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 SELEP16581 610 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 SFTPDP35247 375 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 ABCA11PQ4W5N1 156 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 SLC25A24Q6NUK1 477 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 LYZL2Q7Z4W2 148 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 C11orf42Q8N5U0 333 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 LFNGQ8NES3 379 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 SHDQ96IW2 340 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 WFDC1Q9HC57 220 aa12.4□□□□□ -0.42
PCDHB3-201ENST00000231130 CLDN34H7C241 214 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 ANGPTL7O43827 346 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 IL18BPO95998 194 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 FCGR2AP12318 317 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 IRF2P14316 349 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 CTHP32929 405 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 ERVS71-1P61550 626 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 HLA-DRB3P79483 266 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 COL10A1Q03692 680 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 MAJINQ3KP22 176 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 SAPCD1Q5SSQ6 148 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 SSX7Q7RTT5 188 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 GRINAQ7Z429 371 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 OR4X1Q8NH49 305 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 GNG13Q9P2W3 67 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 SLC7A11Q9UPY5 501 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 V9GYS6 101 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 DIDO1Q9BTC0 2240 aaKnown RBP12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 GAPDHP04406 335 aaKnown RBP12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 SEC11BP0C7V7 166 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 METTL15P1P0C7V9 234 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 FAHP16930 419 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 TBPP20226 339 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 LYPD6Q86Y78 171 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 OR5AS1Q8N127 324 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 ASB10Q8WXI3 467 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 EXTL1Q92935 676 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 TMEM18Q96B42 140 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 ZNF775Q96BV0 537 aaPredicted RBP12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 ZNF581Q9P0T4 197 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 DKKL1Q9UK85 242 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms