RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CAMLGP49069 296 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 B3GALT5-AS1P59052 145 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 SRPXP78539 464 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 S100A12P80511 92 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 ZNF616Q08AN1 781 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 MALLQ13021 153 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 GUK1Q16774 197 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 TSPO2Q5TGU0 170 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 TMEM211Q6ICI0 200 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 FBXW12Q6X9E4 464 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 OR5L1Q8NGL2 311 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 MR1Q95460 341 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 C14orf79Q96F83 325 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 BSCL2Q96G97 398 aaPredicted RBP11.53□□□□□ -0.56
SRP54-201ENST00000216774 C19orf12Q9NSK7 152 aa11.53□□□□□ -0.56
SRP54-201ENST00000216774 NSG1A0A0A6YYJ2 146 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 hCG_38984A0A1B0GV85 526 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 ZNF716A6NP11 495 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 MT-ND4LP03901 98 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 LMO1P25800 156 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 SRD5A2P31213 254 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 MEOX2P50222 304 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 PCBD1P61457 104 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 HABP2Q14520 560 aaPredicted RBP11.52□□□□□ -0.56
SRP54-201ENST00000216774 RIPPLY2Q5TAB7 128 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 AGBL5Q8NDL9 886 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 OR2Y1Q8NGV0 311 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 AKR7LQ8NHP1 331 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 C2CD4CQ8TF44 421 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 DYRK2Q92630 601 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 SGCZQ96LD1 299 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 CLCC1Q96S66 551 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 OR2H1Q9GZK4 316 aa11.52□□□□□ -0.56
SRP54-201ENST00000216774 KIAA1549Q9HCM3 1950 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 C1orf196B1AJZ1 125 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 XRCC2O43543 280 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 NME2P1O60361 137 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 B4GALT1P15291 398 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 RBM11P57052 281 aaKnown RBP11.52□□□□□ -0.57
SRP54-201ENST00000216774 CARD18P57730 90 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 HERV-K104P61576 105 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 PSG4Q00888 419 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 HLA-BQ31612 363 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 AAED1Q7RTV5 226 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 FAM185AQ8N0U4 392 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 ZFP82Q8N141 532 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 OR52M1Q8NGK5 317 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 SNIP1Q8TAD8 396 aaKnown RBP11.52□□□□□ -0.57
SRP54-201ENST00000216774 IFI44Q8TCB0 444 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 HPSE2Q8WWQ2 592 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 HIST1H2BAQ96A08 127 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 PARP12Q9H0J9 701 aaKnown RBP11.52□□□□□ -0.57
SRP54-201ENST00000216774 RPS10P5Q9NQ39 176 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 PLSCR2Q9NRY7 297 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 ZDHHC8Q9ULC8 765 aa11.52□□□□□ -0.57
SRP54-201ENST00000216774 PHF1O43189 567 aaPredicted RBP11.51□□□□□ -0.57
SRP54-201ENST00000216774 GDF9O60383 454 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 ZNF205O95201 554 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 CDS2O95674 445 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 FUT3P21217 361 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 NTF4P34130 210 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 GNMTQ14749 295 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 CLEC9AQ6UXN8 241 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 GGNQ86UU5 652 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 LFNGQ8NES3 379 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 OR4D5Q8NGN0 318 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 TAAR9Q96RI9 348 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 FOXB1Q99853 325 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 PBDC1Q9BVG4 233 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 WNT5BQ9H1J7 359 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 ZNF816-ZNF321PA0A0X1KG74 233 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 A0A1B0GW64 132 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 FAM221AA4D161 298 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 AADACP22760 399 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 AWAT1Q58HT5 328 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 PLCXD3Q63HM9 321 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 ABLIM2Q6H8Q1 611 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 BRICD5Q6PL45 260 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 ALKBH3Q96Q83 286 aaPredicted RBP11.51□□□□□ -0.57
SRP54-201ENST00000216774 EIF5A2Q9GZV4 153 aaKnown RBP11.51□□□□□ -0.57
SRP54-201ENST00000216774 IFT22Q9H7X7 185 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 WDR87Q6ZQQ6 2873 aa11.51□□□□□ -0.57
SRP54-201ENST00000216774 SDK1Q7Z5N4 2213 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 C7orf77A4D0Y5 90 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 MPPED1O15442 326 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 PPYP01298 95 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 PRH1P02810 166 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 ZNF92Q03936 586 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 TRA2AQ13595 282 aaKnown RBP eCLIP11.5□□□□□ -0.57
SRP54-201ENST00000216774 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 Q6ZS49 121 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 SLC35G3Q8N808 338 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 OR11L1Q8NGX0 322 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 OR14L1PQ8NHC6 308 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 SPSB4Q96A44 273 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 BOD1Q96IK1 185 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 SMDT1Q9H4I9 107 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 SPACA1Q9HBV2 294 aa11.5□□□□□ -0.57
SRP54-201ENST00000216774 RCL1Q9Y2P8 373 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms