RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 Q8IYB0 196 aa14.73□□□□□ -0.05
PHGDH-234ENST00000642041 CHST4Q8NCG5 386 aa14.73□□□□□ -0.05
PHGDH-234ENST00000642041 OR51T1Q8NGJ9 327 aa14.73□□□□□ -0.05
PHGDH-234ENST00000642041 SEH1LQ96EE3 360 aa14.73□□□□□ -0.05
PHGDH-234ENST00000642041 SCGB3A2Q96PL1 93 aa14.73□□□□□ -0.05
PHGDH-234ENST00000642041 PKIBQ9C010 78 aa14.73□□□□□ -0.05
PHGDH-234ENST00000642041 LPAR5Q9H1C0 372 aa14.73□□□□□ -0.05
PHGDH-234ENST00000642041 GPR173Q9NS66 373 aa14.73□□□□□ -0.05
PHGDH-234ENST00000642041 STARD10Q9Y365 291 aa14.73□□□□□ -0.05
PHGDH-234ENST00000642041 LINC00854A0A1B0GVQ3 168 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 MEIOCA2RUB1 952 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 A6NIN4 97 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 TMEM210A6NLX4 147 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 VSTM5A8MXK1 200 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 DISC1C4P0D8 188 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 LYZL6O75951 148 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 GLAP06280 429 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 MGMTP16455 207 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 EFNB2P52799 333 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 GNG2P59768 71 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 ZP1P60852 638 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 PPP1CBP62140 327 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 MRPS15P82914 257 aaKnown RBP14.72□□□□□ -0.05
PHGDH-234ENST00000642041 PDZK1IP1Q13113 114 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 UNC119Q13432 240 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 RBMS2Q15434 407 aaKnown RBP14.72□□□□□ -0.05
PHGDH-234ENST00000642041 PCGF3Q3KNV8 242 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 ZNF718Q3SXZ3 478 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 CDNFQ49AH0 187 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 ELP2Q6IA86 826 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 WDR31Q8NA23 367 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 RELL2Q8NC24 303 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-234ENST00000642041 NAXEQ8NCW5 288 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 OR56B2PQ8NGI1 322 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 C1orf147Q96MC9 270 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-234ENST00000642041 SOX7Q9BT81 388 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 PAPOLGQ9BWT3 736 aaKnown RBP14.72□□□□□ -0.05
PHGDH-234ENST00000642041 SPACA1Q9HBV2 294 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 GPN1Q9HCN4 374 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-234ENST00000642041 HRASLSQ9HDD0 168 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 NGBQ9NPG2 151 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 NLKQ9UBE8 527 aa14.72□□□□□ -0.05
PHGDH-234ENST00000642041 FAM230AA0A1W2PPH8 454 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 HMX3A6NHT5 357 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 A8MXE2 369 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 HAX1O00165 279 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 HNRNPCP07910 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
PHGDH-234ENST00000642041 ACAA1P09110 424 aaPredicted RBP14.71□□□□□ -0.05
PHGDH-234ENST00000642041 HIST1H1DP16402 221 aaKnown RBP14.71□□□□□ -0.05
PHGDH-234ENST00000642041 MPZP25189 248 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 OR3A4PP47883 348 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 VEGFCP49767 419 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 PRDX4Q13162 271 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 SLC22A6Q4U2R8 563 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 NHLRC3Q5JS37 347 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 AKAP14Q86UN6 197 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 CADM3Q8N126 398 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 PRRT1Q99946 306 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 OCSTAMPQ9BR26 566 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 RTL8AQ9BWD3 113 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 CHST6Q9GZX3 395 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 ELL3Q9HB65 397 aaPredicted RBP14.71□□□□□ -0.05
PHGDH-234ENST00000642041 IFT46Q9NQC8 304 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 KLK11Q9UBX7 282 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 POLDIP2Q9Y2S7 368 aa14.71□□□□□ -0.05
PHGDH-234ENST00000642041 A0A1W2PPR1 153 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 PQLC2LA1A4F0 135 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 IQCF6A8MYZ5 107 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 ZNF736B4DX44 427 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-234ENST00000642041 ZNF35P13682 527 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 GCH1P30793 250 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 IDH3GP51553 393 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-234ENST00000642041 SELENOVP59797 346 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 TNK1Q13470 666 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 STEAP1BQ6NZ63 245 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 TMEM17Q86X19 198 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 IZUMO1Q8IYV9 350 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 NEDD4LQ96PU5 975 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 SELENOIQ9C0D9 397 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 PTTG3PQ9NZH4 202 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 SLC25A15Q9Y619 301 aa14.7□□□□□ -0.06
PHGDH-234ENST00000642041 ZNF850A8MQ14 1090 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 EEF1E1-BLOC1S5C9J1V9 151 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 LANCL1O43813 399 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 CRYAAP02489 173 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 CD74P04233 296 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 H2AFB2P0C5Z0 115 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 NAT1P18440 290 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 BMP5P22003 454 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 ECI1P42126 302 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 MECP2P51608 486 aaKnown RBP14.69□□□□□ -0.06
PHGDH-234ENST00000642041 TAS2R46P59540 309 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 CDK10Q15131 360 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 MPV17LQ2QL34 196 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 SEZ6L2Q6UXD5 910 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 OSR2Q8N2R0 312 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 OR51F2Q8NH61 342 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 LINC01560Q8TB33 94 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 CCDC107Q8WV48 283 aa14.69□□□□□ -0.06
PHGDH-234ENST00000642041 ALX4Q9H161 411 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms