RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 NTF4P34130 210 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 RGS19P49795 217 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 SHEQ5VZ18 495 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 OPN5Q6U736 354 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 FAM180AQ6UWF9 173 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 GLYATL2Q8WU03 294 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 NAA11Q9BSU3 229 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-221ENST00000640341 GHRLQ9UBU3 117 aa12.7□□□□□ -0.38
SCARB2-221ENST00000640341 ZIC3O60481 467 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 ONECUT2O95948 504 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 NRASP01111 189 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 EPHA8P29322 1005 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-221ENST00000640341 OTX2P32243 289 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 SSR4P51571 173 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 PCOLCEQ15113 449 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 TMEM182Q6ZP80 229 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-221ENST00000640341 RPS19BP1Q86WX3 136 aaKnown RBP12.69□□□□□ -0.38
SCARB2-221ENST00000640341 OR10AD1Q8NGE0 317 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 FAM213BQ8TBF2 198 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 DNASE2BQ8WZ79 361 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 SLC2A9Q9NRM0 540 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 ANAPC10Q9UM13 185 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 CEACAM18A8MTB9 384 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 FCGR3AP08637 254 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 SULT1A2P50226 295 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 OR2B8PP59922 312 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 HERV-K104P61576 105 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 HLA-BQ31612 363 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 ZNF528Q3MIS6 628 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 LYSMD4Q5XG99 296 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 SSC4DQ8WTU2 575 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 SAT2Q96F10 170 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-221ENST00000640341 EDARQ9UNE0 448 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 A0A0U1RQV5 110 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 CRYM-AS1A6NIL9 109 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 ETV2O00321 342 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-221ENST00000640341 LIFP15018 202 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 GPR137CQ8N3F9 429 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 SPEM1Q8N4L4 309 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 TMEM217Q8N7C4 229 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 FADS6Q8N9I5 356 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 ADPRHL1Q8NDY3 354 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 FGFBP3Q8TAT2 258 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 PARPBPQ9NWS1 579 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 V9GYS6 101 aa12.69□□□□□ -0.38
SCARB2-221ENST00000640341 DNAJC13O75165 2243 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 NSG1A0A0A6YYJ2 146 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 IGKV1-12A0A0C4DH73 117 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 PATE3B3GLJ2 98 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 TAAR5O14804 337 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 GPR37O15354 613 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 EIF1BO60739 113 aaKnown RBP12.68□□□□□ -0.38
SCARB2-221ENST00000640341 IGKV1D-12P01611 117 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 CTSDP07339 412 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-221ENST00000640341 ZNF44P15621 663 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 ZNF133P52736 654 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-221ENST00000640341 CEACAM16Q2WEN9 425 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 IGSF11Q5DX21 431 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 ZNF385CQ66K41 422 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-221ENST00000640341 AAED1Q7RTV5 226 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 SLC16A14Q7RTX9 510 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 TDHQ8IZJ6 230 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 ZIC4Q8N9L1 334 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 RSRP1Q9BUV0 290 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 OR51B6Q9H340 312 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 FAM212BQ9NTI7 297 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-221ENST00000640341 A0A096LPE4 126 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 A0A1W2PPZ6 126 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 CARD18P57730 90 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 H3F3AP84243 136 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 IL15RAQ13261 267 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 KCNMB1Q16558 191 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 AWAT1Q58HT5 328 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 WIPI1Q5MNZ9 446 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-221ENST00000640341 ADAM5Q6NVV9 412 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 SLC25A26Q70HW3 274 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 SLC16A13Q7RTY0 426 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 IFI44Q8TCB0 444 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 WFDC1Q9HC57 220 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 PUS1Q9Y606 427 aaKnown RBP eCLIP12.68□□□□□ -0.38
SCARB2-221ENST00000640341 ASPMQ8IZT6 3477 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 FREM1Q5H8C1 2179 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 hCG_1809904A0A1W2PP81 198 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 A0A1W2PR64 198 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 A0A1W2PRV1 198 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 A6NLC8 198 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 ZNF92Q03936 586 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 TMEM268Q5VZI3 342 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 TMEM123Q8N131 208 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 PAPOLGQ9BWT3 736 aaKnown RBP12.68□□□□□ -0.38
SCARB2-221ENST00000640341 NAA60Q9H7X0 242 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 ATPIF1Q9UII2 106 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 R4GN57 208 aa12.68□□□□□ -0.38
SCARB2-221ENST00000640341 MAP1BP46821 2468 aaKnown RBP12.67□□□□□ -0.38
SCARB2-221ENST00000640341 C9J4A7 227 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 NPBWR2P48146 333 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 DVL1P1P54792 670 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-221ENST00000640341 DSCR4P56555 118 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-221ENST00000640341 GUK1Q16774 197 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 SLC23A3Q6PIS1 610 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms