RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 C12orf10Q9HB07 376 aa12.53□□□□□ -0.4
UBE3A-220ENST00000630424 NPTNQ9Y639 398 aa12.53□□□□□ -0.4
UBE3A-220ENST00000630424 LIPT2A6NK58 231 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 DCTN6O00399 190 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 LANCL1O43813 399 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 B3GALNT1O75752 331 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 LY86O95711 162 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 TGIF1Q15583 401 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 RPUSD3Q6P087 351 aaKnown RBP12.52□□□□□ -0.4
UBE3A-220ENST00000630424 OR5AP2Q8NGF4 316 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 MED30Q96HR3 178 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 LOXL4Q96JB6 756 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 SLC25A22Q9H936 323 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 WDR54Q9H977 334 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 RYDENQ9NUL5 291 aaKnown RBP12.52□□□□□ -0.4
UBE3A-220ENST00000630424 SIRT5Q9NXA8 310 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 OR1A1Q9P1Q5 309 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 TNRC6CQ9HCJ0 1690 aaKnown RBP12.52□□□□□ -0.4
UBE3A-220ENST00000630424 B4E171 279 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 TSPAN7P41732 249 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 DYNC2LI1Q8TCX1 351 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 SLC25A32Q9H2D1 315 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 UQCC1Q9NVA1 299 aa12.52□□□□□ -0.4
UBE3A-220ENST00000630424 AKAP11Q9UKA4 1901 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 ETFRF1Q6IPR1 90 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 ZNF788Q6ZQV5 615 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 C14orf79Q96F83 325 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 TMEM231Q9H6L2 316 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 ZNF275Q9NSD4 429 aaPredicted RBP12.52□□□□□ -0.41
UBE3A-220ENST00000630424 RNF7Q9UBF6 113 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 NHSL1Q5SYE7 1610 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 PCM1Q15154 2024 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 FGF2P09038 288 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 MDH2P40926 338 aaKnown RBP12.52□□□□□ -0.41
UBE3A-220ENST00000630424 FAM3AP98173 230 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 TAGLNQ01995 201 aaKnown RBP12.52□□□□□ -0.41
UBE3A-220ENST00000630424 PAX5Q02548 391 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 OR2W3Q7Z3T1 314 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 OR52B4Q8NGK2 314 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 RASL11BQ9BPW5 248 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 COA4Q9NYJ1 87 aa12.52□□□□□ -0.41
UBE3A-220ENST00000630424 TXNDC12O95881 172 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 LIMS3P0CW19 117 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 LIMS4P0CW20 117 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 TMPRSS3P57727 454 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 NAAAQ02083 359 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 FNDC7Q5VTL7 733 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 SPNS3Q6ZMD2 512 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 MSL2Q9HCI7 577 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 TCRBV16S1A1N1A0A5B0 115 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 GPR6P46095 362 aaPredicted RBP12.51□□□□□ -0.41
UBE3A-220ENST00000630424 CDK5Q00535 292 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 MESP2Q0VG99 397 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 LINC00303Q3SY05 128 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 AVPI1Q5T686 147 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 SSX7Q7RTT5 188 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 RAB18Q9NP72 206 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 SIRT3Q9NTG7 399 aaPredicted RBP12.51□□□□□ -0.41
UBE3A-220ENST00000630424 ASPDHA6ND91 283 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 CDC42EP2O14613 210 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 SSBP1Q04837 148 aaKnown RBP12.51□□□□□ -0.41
UBE3A-220ENST00000630424 FABP9Q0Z7S8 132 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 KIAA0141Q14154 515 aaPredicted RBP12.51□□□□□ -0.41
UBE3A-220ENST00000630424 TMEM229BQ8NBD8 167 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 RBPMSQ93062 196 aaKnown RBP12.51□□□□□ -0.41
UBE3A-220ENST00000630424 PCGF1Q9BSM1 259 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 ZMIZ1Q9ULJ6 1067 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 A0A0A6YYJ9 748 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 SPINK9Q5DT21 86 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 C11orf42Q8N5U0 333 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 OR13D1Q8NGV5 346 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 WDR89Q96FK6 387 aaPredicted RBP12.51□□□□□ -0.41
UBE3A-220ENST00000630424 NAGKQ9UJ70 344 aa12.51□□□□□ -0.41
UBE3A-220ENST00000630424 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 GP1BAP07359 652 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 SMIM18P0DKX4 95 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 CD96P40200 585 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 GGTLC2Q14390 218 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 ETV3LQ6ZN32 361 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 LINC00299Q6ZSB3 139 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 RELL2Q8NC24 303 aaPredicted RBP12.5□□□□□ -0.41
UBE3A-220ENST00000630424 NEIL1Q96FI4 390 aaPredicted RBP12.5□□□□□ -0.41
UBE3A-220ENST00000630424 RSRP1Q9BUV0 290 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 NTN4Q9HB63 628 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 FKBP11Q9NYL4 201 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 PCOLCE2Q9UKZ9 415 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 PAPPAQ13219 1627 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 A0A1B0GUH1 482 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 A0A1W2PQD3 144 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 FBXW9Q5XUX1 488 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 ZNF574Q6ZN55 896 aaPredicted RBP12.5□□□□□ -0.41
UBE3A-220ENST00000630424 PECRQ9BY49 303 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 UCK1Q9HA47 277 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 ZNF629Q9UEG4 869 aaPredicted RBP12.5□□□□□ -0.41
UBE3A-220ENST00000630424 TMEFF2Q9UIK5 374 aaPredicted RBP12.5□□□□□ -0.41
UBE3A-220ENST00000630424 POMT1Q9Y6A1 747 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 SCN3AQ9NY46 2000 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 SNRPGP15A8MWD9 76 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 OR2C1O95371 312 aa12.5□□□□□ -0.41
UBE3A-220ENST00000630424 ANKRD34CP0C6C1 535 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms