RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ZP1P60852 638 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 RAP2BP61225 183 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 OR7A5Q15622 319 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 TMEM225Q6GV28 225 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 FAHD2BQ6P2I3 314 aaPredicted RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 AAED1Q7RTV5 226 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 C10orf53Q8N6V4 93 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 OTOSQ8NHW6 89 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 SLC25A36Q96CQ1 311 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 FAHD2AQ96GK7 314 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 INTS14Q96SY0 518 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 AMELYQ99218 206 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 SYT4Q9H2B2 425 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 TMEM14AQ9Y6G1 99 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 A0A1B0GVI7 797 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 TVP23AA6NH52 213 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 H7C417 338 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 GMDSO60547 372 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 ECDO95905 644 aaPredicted RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 CD37P11049 281 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 SNTB2Q13425 540 aaKnown RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 TEX30Q5JUR7 227 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 ATPAF1Q5TC12 328 aaPredicted RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 ASPHD2Q6ICH7 369 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 LRRN1Q6UXK5 716 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 LINGO2Q7L985 606 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 OR11H4Q8NGC9 324 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 OR10AC1Q8NH08 325 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 SYNPRQ8TBG9 265 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 ST8SIA1Q92185 356 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF385AQ96PM9 386 aaKnown RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 OR8B4Q96RC9 309 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 RANBP3Q9H6Z4 567 aaPredicted RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 HEXA-AS1Q9H8Q6 139 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 SEC61A2Q9H9S3 476 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 CRLF2Q9HC73 371 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 LAMP5Q9UJQ1 280 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 ELF5Q9UKW6 265 aaPredicted RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 MRPS7Q9Y2R9 242 aaKnown RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 HSPB11Q9Y547 144 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 TMED7-TICAM2A0A0A6YYA0 188 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 LOC390937A0A1W2PQ73 354 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 UBE2QL1A1L167 161 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 PRSS37A4D1T9 235 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF716A6NP11 495 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 PRAF2O60831 178 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 RPP14O95059 124 aaKnown RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 WNT11O96014 354 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 ERCC1P07992 297 aaPredicted RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 DAOP14920 347 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 CDK2P24941 298 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 POLR2HP52434 150 aaKnown RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 CLDN12P56749 244 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 TAS2R20P59543 309 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 GNG2P59768 71 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 AP3S2P59780 193 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 RPL27P61353 136 aaKnown RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 WDR38Q5JTN6 314 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 DPY19L4Q7Z388 723 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 WDR31Q8NA23 367 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 OR6N2Q8NGY6 317 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 OR6S1Q8NH40 331 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 SLC25A43Q8WUT9 341 aaPredicted RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 ASB17Q8WXJ9 295 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 THRSPQ92748 146 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 RAB1BQ9H0U4 201 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 SLITRK2Q9H156 845 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 SLC17A5Q9NRA2 495 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 PARPBPQ9NWS1 579 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 MRPL22Q9NWU5 206 aaKnown RBP4.12□□□□□ -1.75
LINC00550-201ENST00000629293 KCNG2Q9UJ96 466 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 FZR1Q9UM11 496 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 B9D1Q9UPM9 204 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 TMED7Q9Y3B3 224 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 FLVCR1Q9Y5Y0 555 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 NBEAL2Q6ZNJ1 2754 aa4.12□□□□□ -1.75
LINC00550-201ENST00000629293 OR6C65A6NJZ3 312 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 FTCDNL1E5RQL4 147 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 UBE2CO00762 179 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 SRSF10O75494 262 aaKnown RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 GPANK1O95872 356 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 HIST1H2ABP04908 130 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 CXCR1P25024 350 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 APOBEC1P41238 236 aaKnown RBP4.11□□□□□ -1.75
LINC00550-201ENST00000629293 HTR2BP41595 481 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 CENPAP49450 140 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 PLA2G7Q13093 441 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 CAMK2DQ13557 499 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 SLC17A1Q14916 467 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ALKBH6Q3KRA9 238 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 TMEM69Q5SWH9 247 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 HIST3H2AQ7L7L0 130 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 GRINAQ7Z429 371 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 ADGRG3Q86Y34 549 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 OR51A4Q8NGJ6 313 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 GPR148Q8TDV2 347 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 C15orf40Q8WUR7 153 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 FCAMRQ8WWV6 532 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 SNAPC3Q92966 411 aa4.11□□□□□ -1.75
LINC00550-201ENST00000629293 HIST1H2ACQ93077 130 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms