RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 WNT5BQ9H1J7 359 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 CENPEQ02224 2701 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 C9orf170A2RU37 121 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 ONECUT2O95948 504 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 RCC1P18754 421 aaPredicted RBP6.52□□□□□ -1.37
PKP4-217ENST00000628904 TGFBR3Q03167 851 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 RAB32Q13637 225 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 RAB35Q15286 201 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 CLVS2Q5SYC1 327 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 FAM27BQ5VT28 67 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 ZNF767PQ75MW2 155 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 CCDC28AQ8IWP9 274 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 SLC30A7Q8NEW0 376 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 C12orf4Q9NQ89 552 aa6.52□□□□□ -1.37
PKP4-217ENST00000628904 C7orf66A4D0T2 115 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 MCRIP1C9JLW8 97 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 GPR37O15354 613 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 EIF2S3P41091 472 aaKnown RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 AKR1C3P42330 323 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 PAN3Q58A45 887 aaKnown RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 DRAM2Q6UX65 266 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 CLEC18BQ6UXF7 455 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 SSX9Q7RTT3 188 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 GGNQ86UU5 652 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 ZNF695Q8IW36 515 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 PDZD9Q8IXQ8 264 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 ADPRHL1Q8NDY3 354 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 RTN4IP1Q8WWV3 396 aaPredicted RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 EXTL1Q92935 676 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 ZC3H10Q96K80 434 aaKnown RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 GSX2Q9BZM3 304 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 PARD6AQ9NPB6 346 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 AKAP13Q12802 2813 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 LOC102723996A0A087X1L8 192 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 OR6C6A6NF89 314 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 M0R1B8 84 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 GSTZ1O43708 216 aaPredicted RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 RHBDL1O75783 438 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 OR8U9P0C7N5 309 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 AKR1D1P51857 326 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 MRPS34P82930 218 aaKnown RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 VWA1Q6PCB0 445 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 ZFP62Q8NB50 900 aaPredicted RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 ZBTB44Q8NCP5 570 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 OR8U1Q8NH10 309 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 SLC25A28Q96A46 364 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 OPN3Q9H1Y3 402 aaPredicted RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 ZNF703Q9H7S9 590 aaPredicted RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 SEMA5BQ9P283 1151 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 NUP50Q9UKX7 468 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 PTPN13Q12923 2485 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 A0A1W2PNV4 684 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 CD300LBA8K4G0 201 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 SPRY3O43610 288 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 CST7O76096 145 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 OR2F2O95006 317 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 SLC34A2O95436 690 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 OR5AC1P0C628 307 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 TRAPPC2P0DI81 140 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 TRAPPC2BP0DI82 140 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 ZNF17P17021 662 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 WT1P19544 449 aaPredicted RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 PTAFRP25105 342 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 P2RY4P51582 365 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 LSM6P62312 80 aaKnown RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 VAMP2P63027 116 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 LYG2Q86SG7 212 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 CISD2Q8N5K1 135 aaKnown RBP6.51□□□□□ -1.37
PKP4-217ENST00000628904 TMEM229BQ8NBD8 167 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 OR10V1Q8NGI7 309 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 CRIM1Q9NZV1 1036 aa6.51□□□□□ -1.37
PKP4-217ENST00000628904 ZNF816-ZNF321PA0A0X1KG74 233 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 LOC105371267A0A1B0GV96 52 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 ZNF503-AS2A6NEH8 195 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 SSX5O60225 188 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 TK1P04183 234 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 GIPP09681 153 aaPredicted RBP6.5□□□□□ -1.37
PKP4-217ENST00000628904 PRKACBP22694 351 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 MRPL49Q13405 166 aaKnown RBP6.5□□□□□ -1.37
PKP4-217ENST00000628904 TOR2AQ5JU69 321 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 PXDC1Q5TGL8 231 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 TMEM88Q6PEY1 159 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 RFPL4BQ6ZWI9 263 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 ZDHHC23Q8IYP9 409 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 TMEM123Q8N131 208 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 ZCCHC24Q8N2G6 241 aaKnown RBP6.5□□□□□ -1.37
PKP4-217ENST00000628904 FAM109AQ8N4B1 249 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 HAS2Q92819 552 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 SYT3Q9BQG1 590 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 C20orf24Q9BUV8 137 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 CHST5Q9GZS9 411 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 MOB1AQ9H8S9 216 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 ZNF286AQ9HBT8 521 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 ANKHD1Q8IWZ3 2542 aaKnown RBP6.5□□□□□ -1.37
PKP4-217ENST00000628904 ATG2AQ2TAZ0 1938 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 C19orf67A6NJJ6 358 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 DEGS1O15121 323 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 LRP3O75074 770 aa6.5□□□□□ -1.37
PKP4-217ENST00000628904 F12P00748 615 aaPredicted RBP6.5□□□□□ -1.37
PKP4-217ENST00000628904 GP1BAP07359 652 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms