RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 WIPF3A6NGB9 483 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 CDC14BO60729 498 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 SLC22A5O76082 557 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 BSPH1Q075Z2 132 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 CLVS2Q5SYC1 327 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 TEX261Q6UWH6 196 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 GLDNQ6ZMI3 551 aaPredicted RBP10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 GABRG1Q8N1C3 465 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 C12orf45Q8N5I9 185 aaPredicted RBP10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 TMEM229BQ8NBD8 167 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 MED30Q96HR3 178 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 SPACA5Q96QH8 159 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 U3KQ87 197 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 COL27A1Q8IZC6 1860 aaPredicted RBP10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 FXYD6-FXYD2A0A087WZ82 144 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 ZNF850A8MQ14 1090 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 CA6P23280 308 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 CD34P28906 385 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 UCP2P55851 309 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 OR8B12Q8NGG6 310 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 PTX4Q96A99 478 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 BBC3Q96PG8 261 aaPredicted RBP10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 FXYD6Q9H0Q3 95 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 MEIS3P1A6NDR6 274 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 F5H5P2 479 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 IFNA21P01568 189 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 GSTP1P09211 210 aaKnown RBP10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 CD40P25942 277 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 NTF4P34130 210 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 TAS2R46P59540 309 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 EIF5AP63241 154 aaKnown RBP10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 CYCSP99999 105 aaKnown RBP10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 DHODHQ02127 395 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 IDO2Q6ZQW0 420 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 NAA40Q86UY6 237 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 CDH26Q8IXH8 852 aa10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 INO80EQ8NBZ0 244 aaPredicted RBP10.76□□□□□ -0.69
SYNGAP1-207ENST00000628646 NDUFB6O95139 128 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 NRASP01111 189 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 VSIG10L2P0DP72 767 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 NAAAQ02083 359 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 RELL2Q8NC24 303 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 DEFB108BQ8NET1 73 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 COQ8AQ8NI60 647 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 PHB2Q99623 299 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 ZNF436Q9C0F3 470 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 RGCCQ9H4X1 137 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 OR14J1Q9UGF5 321 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 ZNF107Q9UII5 783 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 LAMP3Q9UQV4 416 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 FRYQ5TBA9 3013 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 GSK3AP49840 483 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 ABCA11PQ4W5N1 156 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 NKAPLQ5M9Q1 402 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 MKXQ8IYA7 352 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 DVL3Q92997 716 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 C10orf35Q96D05 121 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 MSL2Q9HCI7 577 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 PLEKHJ1Q9NW61 149 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 KCNIP3Q9Y2W7 256 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 LOC390937A0A1W2PQ73 354 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 RPS10-NUDT3A0A1W2PQS6 291 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 NGFP01138 241 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 RLN2P04090 185 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 ANOS1P23352 680 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 FGFBP3Q8TAT2 258 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 TMEM171Q8WVE6 324 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 ELMOD3Q96FG2 381 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 SEC22CQ9BRL7 303 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 RTL8AQ9BWD3 113 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 TMEM272A0A1B0GTI8 110 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 LMX1BO60663 402 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 GABRA2P47869 451 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 ZNF626Q68DY1 528 aa10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 METTL17Q9H7H0 456 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 ZNF701Q9NV72 531 aaPredicted RBP10.75□□□□□ -0.69
SYNGAP1-207ENST00000628646 LOC100509620A0A075B734 347 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 KANTRA0A1W2PQU2 76 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 CD300LBA8K4G0 201 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 OR2A4O95047 310 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 GUCA2AQ02747 115 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 C2orf68Q2NKX9 166 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 OR8H3Q8N146 312 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 SPICQ8N5J4 248 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 OR13G1Q8NGZ3 307 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 ASB13Q8WXK3 278 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 BOD1Q96IK1 185 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 OR2A7Q96R45 310 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 PFDN2Q9UHV9 154 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 ZNF816-ZNF321PA0A0X1KG74 233 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 TRAPPC2LH3BP13 241 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 ANXA7P20073 488 aaKnown RBP10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 RBMXP38159 391 aaKnown RBP10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 ZNF133P52736 654 aaPredicted RBP10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 OR8B8Q15620 311 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 SEM1Q6ZVN7 128 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 ZDHHC23Q8IYP9 409 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 ZNF611Q8N823 705 aa10.74□□□□□ -0.69
SYNGAP1-207ENST00000628646 CPEB3Q8NE35 698 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms